Detail information of GWHGAAZE027500


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002270960.30PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera]
COGYP_007070401.10.0000005WD40 repeat-containing protein
Swissprottr|Q93VR9|SEH1_ARATH3E-149Protein SEH1 {ECO:0000303|PubMed:21189294}
trEMBLtr|A5BBL2|A5BBL2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN61200.1}
TAIR10AT1G64350.14E-120Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2097125620975693-
GWHAAZE00000008mRNA2097125620975693-
GWHAAZE00000008exon2097125620971387-
GWHAAZE00000008exon2097158520971711-
GWHAAZE00000008exon2097200020972112-
GWHAAZE00000008exon2097241420972569-
GWHAAZE00000008exon2097303520973112-
GWHAAZE00000008exon2097390220974077-
GWHAAZE00000008exon2097426520974376-
GWHAAZE00000008exon2097553520975693-
GWHAAZE00000008CDS2097553520975693-
GWHAAZE00000008CDS2097426520974376-
GWHAAZE00000008CDS2097390220974077-
GWHAAZE00000008CDS2097303520973112-
GWHAAZE00000008CDS2097241420972569-
GWHAAZE00000008CDS2097200020972112-
GWHAAZE00000008CDS2097158520971711-
GWHAAZE00000008CDS2097125620971387-
Transcript Sequence

Network for GWHGAAZE027500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD403013320.0014
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K14299SEH1 RNA transport map03013
mTOR signaling pathwaymap04150

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.718
SRR3591706second leaf1.336
SRR3591707mature leaf1.454
SRR3591708Shoot apex3.919
SRR3591709Stem1.486
SRR3591710White floral bud2.195
SRR3591711White flower2.545
SRR3591712Green floral bud4.046
SRR3591713Yellow flower1.451
SRP173429 SRR8316895Juvenile bud stage 4.302
SRR8316896Juvenile bud stage 6.550
SRR8316897Juvenile bud stage 3.135
SRR8316894Third green stage 2.835
SRR8316900Third green stage 7.372
SRR8316901Third green stage 5.719
SRR8316898Complete white stage 1.110
SRR8316899Complete white stage 7.739
SRR8316903Complete white stage 1.775
SRR8316902Silver flowering stage1.985
SRR8316904Silver flowering stage2.220
SRR8316905Silver flowering stage1.064
SRR8316906Gold flowering stage 3.221
SRR8316907Gold flowering stage 3.042
SRR8316908Gold flowering stage 3.248
SRP132670SRR6706286Control3.804
SRR6706287Light intensity 50%3.892
SRR6706288Light intensity 20%3.840
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.119
CNS0095593Slightly white alabastrum(diploid) 29.297
CNS0095594Slightly white alabastrum(diploid) 310.976
CNS0095595Whole white alabastrum(diploid) 27.908
CNS0095596Whole white alabastrum(diploid) 36.681
CNS0095597Whole white alabastrum(diploid) 45.492
CNS0095598Silvery flower (diploied) 110.769
CNS0095599Silvery flower (diploied) 27.363
CNS0095600Silvery flower (diploied) 34.598
CNS0095601Golden flower (diploid) 16.186
CNS0095602Golden flower (diploid) 24.746
CNS0095603Golden flower (diploid) 34.715
CNS0095604Slightly white alabastrum(tetraploid) 13.960
CNS0095605Slightly white alabastrum(tetraploid) 23.799
CNS0095606Slightly white alabastrum(tetraploid) 33.989
CNS0095607Whole white alabastrum(tetraploid) 12.490
CNS0095608Whole white alabastrum(tetraploid) 21.431
CNS0095609Whole white alabastrum(tetraploid) 33.690
CNS0095610Silvery flower (tetraploid) 11.803
CNS0095611Silvery flower (tetraploid) 22.708
CNS0095612Silvery flower (tetraploid) 30.699
CNS0095613Golden flower (tetraploid) 11.252
CNS0095614Golden flower (tetraploid) 21.886
CNS0095615Golden flower (tetraploid) 30.278
CRA001975CRR073297Stem 16.057
CRR073298Stem 26.625
CRR073299Stem 36.139
CRR073300Leaf 15.028
CRR073301Leaf 25.948
CRR073302Leaf 36.859
CRR073303Juvenile bud 16.278
CRR073304Juvenile bud 24.069
CRR073305Juvenile bud 36.459
CRR073306Third green 10.130
CRR073307Third green 20.309
CRR073308Third green 31.022
CRR073309Second white 11.054
CRR073310Second white 21.047
CRR073311Second white 30.455
CRR073312Silver flowering 10.747
CRR073313Silver flowering 20.703
CRR073314Silver flowering 30.727
CRR073315Gold flowering 19.184
CRR073316Gold flowering 25.140
CRR073317Gold flowering 35.610
CRR073318Tawny withering 15.871
CRR073319Tawny withering 28.125
CRR073320Tawny withering 35.695