Detail information of GWHGAAZE027472


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011070353.10PREDICTED: protein NLP7 isoform X1 [Sesamum indicum]
Swissprottr|Q84TH9|NLP7_ARATH0Protein NLP7
trEMBLtr|M1AWJ8|M1AWJ8_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400031943}
TAIR10AT4G24020.15E-154NIN like protein 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2042880720431243-
GWHAAZE00000008mRNA2042880720431243-
GWHAAZE00000008exon2042880720429873-
GWHAAZE00000008exon2043034620431243-
GWHAAZE00000008CDS2043034620431243-
GWHAAZE00000008CDS2042880720429873-
Transcript Sequence

Network for GWHGAAZE027472

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02042.16RWP-RK2783253.00E-26
PF00564.25PB15726535.60E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyRWP-RK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.715
SRR3591706second leaf13.317
SRR3591707mature leaf41.233
SRR3591708Shoot apex7.715
SRR3591709Stem15.147
SRR3591710White floral bud6.876
SRR3591711White flower8.188
SRR3591712Green floral bud3.824
SRR3591713Yellow flower4.912
SRP173429 SRR8316895Juvenile bud stage 4.300
SRR8316896Juvenile bud stage 3.529
SRR8316897Juvenile bud stage 2.132
SRR8316894Third green stage 1.443
SRR8316900Third green stage 2.367
SRR8316901Third green stage 1.926
SRR8316898Complete white stage 0.997
SRR8316899Complete white stage 3.094
SRR8316903Complete white stage 1.928
SRR8316902Silver flowering stage1.172
SRR8316904Silver flowering stage1.044
SRR8316905Silver flowering stage0.612
SRR8316906Gold flowering stage 1.992
SRR8316907Gold flowering stage 2.559
SRR8316908Gold flowering stage 4.388
SRP132670SRR6706286Control1.988
SRR6706287Light intensity 50%3.042
SRR6706288Light intensity 20%3.248
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.016
CNS0095593Slightly white alabastrum(diploid) 23.047
CNS0095594Slightly white alabastrum(diploid) 34.016
CNS0095595Whole white alabastrum(diploid) 23.191
CNS0095596Whole white alabastrum(diploid) 31.440
CNS0095597Whole white alabastrum(diploid) 41.772
CNS0095598Silvery flower (diploied) 110.664
CNS0095599Silvery flower (diploied) 26.214
CNS0095600Silvery flower (diploied) 35.081
CNS0095601Golden flower (diploid) 16.422
CNS0095602Golden flower (diploid) 27.501
CNS0095603Golden flower (diploid) 38.042
CNS0095604Slightly white alabastrum(tetraploid) 15.010
CNS0095605Slightly white alabastrum(tetraploid) 23.455
CNS0095606Slightly white alabastrum(tetraploid) 36.829
CNS0095607Whole white alabastrum(tetraploid) 13.855
CNS0095608Whole white alabastrum(tetraploid) 22.079
CNS0095609Whole white alabastrum(tetraploid) 32.490
CNS0095610Silvery flower (tetraploid) 15.293
CNS0095611Silvery flower (tetraploid) 26.801
CNS0095612Silvery flower (tetraploid) 34.173
CNS0095613Golden flower (tetraploid) 12.260
CNS0095614Golden flower (tetraploid) 26.254
CNS0095615Golden flower (tetraploid) 32.688
CRA001975CRR073297Stem 17.340
CRR073298Stem 25.401
CRR073299Stem 38.261
CRR073300Leaf 11.682
CRR073301Leaf 22.643
CRR073302Leaf 32.155
CRR073303Juvenile bud 11.656
CRR073304Juvenile bud 21.071
CRR073305Juvenile bud 32.857
CRR073306Third green 11.812
CRR073307Third green 21.401
CRR073308Third green 31.798
CRR073309Second white 11.105
CRR073310Second white 20.889
CRR073311Second white 30.695
CRR073312Silver flowering 10.649
CRR073313Silver flowering 21.125
CRR073314Silver flowering 30.838
CRR073315Gold flowering 17.103
CRR073316Gold flowering 26.351
CRR073317Gold flowering 33.689
CRR073318Tawny withering 16.519
CRR073319Tawny withering 27.914
CRR073320Tawny withering 37.012