Detail information of GWHGAAZE027301


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008364413.10PREDICTED: serine/threonine-protein phosphatase PP-X isozyme 2 [Malus domestica]
COGYP_001541554.15E-40metallophosphoesterase
Swissprottr|P48528|PPX2_ARATH0Serine/threonine-protein phosphatase PP-X isozyme 2
trEMBLtr|V4UHY6|V4UHY6_9ROSI0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIR10AT5G55260.13E-176protein phosphatase X 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1735652617362878-
GWHAAZE00000008mRNA1735652617362878-
GWHAAZE00000008exon1736269317362878-
GWHAAZE00000008exon1735967117359823-
GWHAAZE00000008exon1735810117358163-
GWHAAZE00000008exon1735794117358026-
GWHAAZE00000008exon1735759717357672-
GWHAAZE00000008exon1735724817357516-
GWHAAZE00000008exon1735706417357142-
GWHAAZE00000008exon1735652617356576-
GWHAAZE00000008five_prime_UTR1736283417362878-
GWHAAZE00000008CDS1736269317362833-
GWHAAZE00000008CDS1735967117359823-
GWHAAZE00000008CDS1735810117358163-
GWHAAZE00000008CDS1735794117358026-
GWHAAZE00000008CDS1735759717357672-
GWHAAZE00000008CDS1735724817357516-
GWHAAZE00000008CDS1735706417357142-
GWHAAZE00000008CDS1735652617356576-
Transcript Sequence

Network for GWHGAAZE027301

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00149.29Metallophos452371.40E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15423PPP4C Glucagon signaling pathway map04922

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.528
SRR3591706second leaf23.704
SRR3591707mature leaf41.422
SRR3591708Shoot apex19.639
SRR3591709Stem18.991
SRR3591710White floral bud13.717
SRR3591711White flower16.330
SRR3591712Green floral bud17.078
SRR3591713Yellow flower10.602
SRP173429 SRR8316895Juvenile bud stage 11.214
SRR8316896Juvenile bud stage 15.941
SRR8316897Juvenile bud stage 7.900
SRR8316894Third green stage 6.280
SRR8316900Third green stage 19.660
SRR8316901Third green stage 19.885
SRR8316898Complete white stage 9.417
SRR8316899Complete white stage 33.071
SRR8316903Complete white stage 16.336
SRR8316902Silver flowering stage10.890
SRR8316904Silver flowering stage11.327
SRR8316905Silver flowering stage5.175
SRR8316906Gold flowering stage 18.047
SRR8316907Gold flowering stage 16.561
SRR8316908Gold flowering stage 19.949
SRP132670SRR6706286Control16.689
SRR6706287Light intensity 50%17.195
SRR6706288Light intensity 20%18.731
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.956
CNS0095593Slightly white alabastrum(diploid) 213.521
CNS0095594Slightly white alabastrum(diploid) 321.283
CNS0095595Whole white alabastrum(diploid) 217.774
CNS0095596Whole white alabastrum(diploid) 316.554
CNS0095597Whole white alabastrum(diploid) 416.189
CNS0095598Silvery flower (diploied) 113.945
CNS0095599Silvery flower (diploied) 211.560
CNS0095600Silvery flower (diploied) 319.599
CNS0095601Golden flower (diploid) 111.210
CNS0095602Golden flower (diploid) 213.315
CNS0095603Golden flower (diploid) 316.056
CNS0095604Slightly white alabastrum(tetraploid) 116.377
CNS0095605Slightly white alabastrum(tetraploid) 216.744
CNS0095606Slightly white alabastrum(tetraploid) 321.627
CNS0095607Whole white alabastrum(tetraploid) 117.454
CNS0095608Whole white alabastrum(tetraploid) 213.407
CNS0095609Whole white alabastrum(tetraploid) 316.961
CNS0095610Silvery flower (tetraploid) 117.655
CNS0095611Silvery flower (tetraploid) 213.907
CNS0095612Silvery flower (tetraploid) 311.548
CNS0095613Golden flower (tetraploid) 110.395
CNS0095614Golden flower (tetraploid) 216.456
CNS0095615Golden flower (tetraploid) 312.587
CRA001975CRR073297Stem 121.636
CRR073298Stem 221.877
CRR073299Stem 324.050
CRR073300Leaf 124.001
CRR073301Leaf 220.108
CRR073302Leaf 320.548
CRR073303Juvenile bud 121.101
CRR073304Juvenile bud 218.325
CRR073305Juvenile bud 322.401
CRR073306Third green 19.586
CRR073307Third green 210.307
CRR073308Third green 311.277
CRR073309Second white 19.357
CRR073310Second white 212.185
CRR073311Second white 38.929
CRR073312Silver flowering 18.582
CRR073313Silver flowering 26.765
CRR073314Silver flowering 37.059
CRR073315Gold flowering 116.715
CRR073316Gold flowering 217.009
CRR073317Gold flowering 319.432
CRR073318Tawny withering 126.840
CRR073319Tawny withering 218.090
CRR073320Tawny withering 330.536