Gene detail

Detail information of GWHGAAZE026994

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002302843.2	0	hypothetical protein POPTR_0002s22080g [Populus trichocarpa]
Swissprot	tr\|Q9FGK3\|MO25N_ARATH	3E-169	Putative MO25-like protein At5g47540
trEMBL	tr\|B9GTQ7\|B9GTQ7_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEE82116.2}
TAIR10	AT5G47540.1	5E-131	Mo25 family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	13314530	13320077	+
GWHAAZE00000008	mRNA	13314530	13320077	+
GWHAAZE00000008	exon	13314530	13314885	+
GWHAAZE00000008	exon	13316918	13317079	+
GWHAAZE00000008	exon	13317242	13317360	+
GWHAAZE00000008	exon	13317603	13317677	+
GWHAAZE00000008	exon	13318116	13318209	+
GWHAAZE00000008	exon	13318618	13318677	+
GWHAAZE00000008	exon	13318851	13318916	+
GWHAAZE00000008	exon	13319195	13319293	+
GWHAAZE00000008	exon	13319633	13319677	+
GWHAAZE00000008	exon	13319768	13319870	+
GWHAAZE00000008	exon	13319965	13320077	+
GWHAAZE00000008	five_prime_UTR	13314530	13314765	+
GWHAAZE00000008	CDS	13314766	13314885	+
GWHAAZE00000008	CDS	13316918	13317079	+
GWHAAZE00000008	CDS	13317242	13317360	+
GWHAAZE00000008	CDS	13317603	13317677	+
GWHAAZE00000008	CDS	13318116	13318209	+
GWHAAZE00000008	CDS	13318618	13318677	+
GWHAAZE00000008	CDS	13318851	13318916	+
GWHAAZE00000008	CDS	13319195	13319293	+
GWHAAZE00000008	CDS	13319633	13319677	+
GWHAAZE00000008	CDS	13319768	13319870	+
GWHAAZE00000008	CDS	13319965	13320077	+

Transcript Sequence
>GWHTAAZE027028 AACTCAAACCCAAAAACGAACTGTATTTGTTGCGTTCTACGAACAACTAACCATTCCAATCCCCTGCTATATATATCTCCTCCTTCCTCATCTTCTATTTTCTCCCTCCATCTATCTCCTCTAAAGCCCTGACCATCGCTAAATCTGAAATCACCAACAGACAATCGCCGATAAATTCACCGGCGCCGGTGGTTTTGTTATGCTTTTATTGAAATTCAATCCCTTCATCGATCAAAATGAAGGGGCTCTTCAAGTCCAAGCCCAAAACTCCGCCAGAGCTCGTCCATCAGGTCCGCGAGCTCCTCATCTATGTCACCACCACTACCGAGACCCGCCAAAGCAAGCGCGATGAAAAGATGTCTGAACTAAGCAAACTCCTTTTAGAGATACGAACAGTACTTTATGGCACTGATCAATCAGAGCCAAATTCAGAGGCTTGTGCCAAGCTGACAATGGAGTTCTTTAAAGACGACACAATGCGTCTTCTCATCCTTGCTCTACCTAAATTTGGGCTGGGAGCTCGTCAAGATACTACTCATGTGATTGCAAATTTGCAAAGGCAACGAATCAATTCGCAGACAGTTGCCTCGGATTACTTGGAAAAGAACATAGATCTTATTGATGTTTTGGTTCCTGGATATGAAGACTCTGACGTTGTTCTATCCTATGGTGCAATTTTAAGAGATTGCATCCGCCATCAACTCGTGGCAAAGTATGTAATGGAGTCGGAGCATATAAACAAATTCTTTAAATATATACAAAGTCCCAATTTTGATATAGCATCAGATGCAGCTGCAACTTTTAAAGAGCTTTTAACAAGGCATAAATCGATTGTTGCTGAATTTCTTTCCAACAATTATGACTGGTTTTTCCAGGAATACTCAAAATTGCTTGAATCTCCAAACTACATCACTAAACGGCACGCTGTCAAGTTATTGGGAGCAATGCTATTGGATCGATCAAATTGTTCGGTGATGGTGCGGTTCGTGAGCTCATTGGACAATTTAAGGATTCTCATGAATCTGCTGAGGGATCCAAACAAGACAATCCAACTGGAAGCATTTCACGTATTTAAGCTTTTTGCTGCTAATCAAAATAAGCCTCCCGAGATTGTGAATGTGCTCGTTGTAAATAGAAGCAAGCTCCTCCGATTCTTCGCCGACTTCAATTGTGATAAAGAGGATGAGCAATTCGAAGCAGATAAAGCTCAAGTTGTGAACGAAATTGAAACCCTCGAACCCACAAGTCCTCCAAGTTCAGCTTTAAACAGTTGTGATGAGATTCCCTGTTAA

Network for GWHGAAZE026994

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08569.12	Mo25	4	334	1.30E-118

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K08272	CAB39, MO25	AMPK signaling pathway	map04152
K08272	CAB39, MO25	mTOR signaling pathway	map04150

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.638
	SRR3591706	second leaf	8.970
	SRR3591707	mature leaf	19.692
	SRR3591708	Shoot apex	11.037
	SRR3591709	Stem	20.886
	SRR3591710	White floral bud	17.069
	SRR3591711	White flower	18.183
	SRR3591712	Green floral bud	21.593
	SRR3591713	Yellow flower	20.028
SRP173429	SRR8316895	Juvenile bud stage	13.473
	SRR8316896	Juvenile bud stage	21.332
	SRR8316897	Juvenile bud stage	10.811
	SRR8316894	Third green stage	9.228
	SRR8316900	Third green stage	27.212
	SRR8316901	Third green stage	26.911
	SRR8316898	Complete white stage	6.060
	SRR8316899	Complete white stage	17.830
	SRR8316903	Complete white stage	13.010
	SRR8316902	Silver flowering stage	9.756
	SRR8316904	Silver flowering stage	13.730
	SRR8316905	Silver flowering stage	5.753
	SRR8316906	Gold flowering stage	19.595
	SRR8316907	Gold flowering stage	18.193
	SRR8316908	Gold flowering stage	17.558
SRP132670	SRR6706286	Control	19.767
	SRR6706287	Light intensity 50%	20.243
	SRR6706288	Light intensity 20%	21.014
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	23.324
	CNS0095593	Slightly white alabastrum(diploid) 2	20.088
	CNS0095594	Slightly white alabastrum(diploid) 3	24.855
	CNS0095595	Whole white alabastrum(diploid) 2	24.938
	CNS0095596	Whole white alabastrum(diploid) 3	27.794
	CNS0095597	Whole white alabastrum(diploid) 4	23.999
	CNS0095598	Silvery flower (diploied) 1	11.455
	CNS0095599	Silvery flower (diploied) 2	12.391
	CNS0095600	Silvery flower (diploied) 3	18.584
	CNS0095601	Golden flower (diploid) 1	13.203
	CNS0095602	Golden flower (diploid) 2	15.064
	CNS0095603	Golden flower (diploid) 3	14.147
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.899
	CNS0095605	Slightly white alabastrum(tetraploid) 2	17.580
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.235
	CNS0095607	Whole white alabastrum(tetraploid) 1	18.823
	CNS0095608	Whole white alabastrum(tetraploid) 2	17.897
	CNS0095609	Whole white alabastrum(tetraploid) 3	14.039
	CNS0095610	Silvery flower (tetraploid) 1	10.030
	CNS0095611	Silvery flower (tetraploid) 2	9.378
	CNS0095612	Silvery flower (tetraploid) 3	9.168
	CNS0095613	Golden flower (tetraploid) 1	6.265
	CNS0095614	Golden flower (tetraploid) 2	7.914
	CNS0095615	Golden flower (tetraploid) 3	8.033
CRA001975	CRR073297	Stem 1	16.567
	CRR073298	Stem 2	14.672
	CRR073299	Stem 3	11.170
	CRR073300	Leaf 1	19.256
	CRR073301	Leaf 2	17.057
	CRR073302	Leaf 3	13.460
	CRR073303	Juvenile bud 1	16.213
	CRR073304	Juvenile bud 2	13.668
	CRR073305	Juvenile bud 3	9.392
	CRR073306	Third green 1	11.325
	CRR073307	Third green 2	11.027
	CRR073308	Third green 3	12.025
	CRR073309	Second white 1	9.927
	CRR073310	Second white 2	14.001
	CRR073311	Second white 3	12.973
	CRR073312	Silver flowering 1	14.618
	CRR073313	Silver flowering 2	12.792
	CRR073314	Silver flowering 3	16.358
	CRR073315	Gold flowering 1	9.088
	CRR073316	Gold flowering 2	9.245
	CRR073317	Gold flowering 3	6.973
	CRR073318	Tawny withering 1	15.123
	CRR073319	Tawny withering 2	20.155
	CRR073320	Tawny withering 3	17.460