Detail information of GWHGAAZE026842


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002276551.11.27893E-33PREDICTED: tyrosine aminotransferase [Vitis vinifera]
Swissprottr|Q9SIV0|SUR1_ARATH2E-23S-alkyl-thiohydroximate lyase SUR1
trEMBLtr|E0CTH7|E0CTH7_VITVI5E-34Putative uncharacterized protein {ECO:0000313|EMBL:CBI21892.3}
TAIR10AT2G20610.21E-15Tyrosine transaminase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1087218010872458-
GWHAAZE00000008mRNA1087218010872458-
GWHAAZE00000008exon1087218010872458-
GWHAAZE00000008CDS1087218010872458-
Transcript Sequence

Network for GWHGAAZE026842

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00815TAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Cysteine and methionine metabolismmap00270
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960
Novobiocin biosynthesismap00401

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf86.965
SRR3591706second leaf6.962
SRR3591707mature leaf1.837
SRR3591708Shoot apex36.298
SRR3591709Stem6.556
SRR3591710White floral bud64.627
SRR3591711White flower17.766
SRR3591712Green floral bud87.653
SRR3591713Yellow flower5.977
SRP173429 SRR8316895Juvenile bud stage 31.635
SRR8316896Juvenile bud stage 42.405
SRR8316897Juvenile bud stage 25.759
SRR8316894Third green stage 18.001
SRR8316900Third green stage 77.860
SRR8316901Third green stage 99.030
SRR8316898Complete white stage 37.333
SRR8316899Complete white stage 135.288
SRR8316903Complete white stage 45.205
SRR8316902Silver flowering stage6.387
SRR8316904Silver flowering stage7.683
SRR8316905Silver flowering stage4.267
SRR8316906Gold flowering stage 9.034
SRR8316907Gold flowering stage 7.774
SRR8316908Gold flowering stage 6.444
SRP132670SRR6706286Control311.626
SRR6706287Light intensity 50%272.141
SRR6706288Light intensity 20%269.703
CNP0000432CNS0095592Slightly white alabastrum(diploid) 164.741
CNS0095593Slightly white alabastrum(diploid) 243.970
CNS0095594Slightly white alabastrum(diploid) 337.225
CNS0095595Whole white alabastrum(diploid) 231.197
CNS0095596Whole white alabastrum(diploid) 332.287
CNS0095597Whole white alabastrum(diploid) 439.483
CNS0095598Silvery flower (diploied) 140.038
CNS0095599Silvery flower (diploied) 228.121
CNS0095600Silvery flower (diploied) 334.228
CNS0095601Golden flower (diploid) 118.569
CNS0095602Golden flower (diploid) 228.561
CNS0095603Golden flower (diploid) 324.789
CNS0095604Slightly white alabastrum(tetraploid) 175.099
CNS0095605Slightly white alabastrum(tetraploid) 242.270
CNS0095606Slightly white alabastrum(tetraploid) 3242.332
CNS0095607Whole white alabastrum(tetraploid) 141.792
CNS0095608Whole white alabastrum(tetraploid) 224.571
CNS0095609Whole white alabastrum(tetraploid) 3129.272
CNS0095610Silvery flower (tetraploid) 118.232
CNS0095611Silvery flower (tetraploid) 237.379
CNS0095612Silvery flower (tetraploid) 313.307
CNS0095613Golden flower (tetraploid) 11.842
CNS0095614Golden flower (tetraploid) 25.931
CNS0095615Golden flower (tetraploid) 35.972
CRA001975CRR073297Stem 1146.745
CRR073298Stem 2149.053
CRR073299Stem 3144.734
CRR073300Leaf 1203.127
CRR073301Leaf 2189.316
CRR073302Leaf 3163.755
CRR073303Juvenile bud 1175.651
CRR073304Juvenile bud 2214.688
CRR073305Juvenile bud 3281.523
CRR073306Third green 120.285
CRR073307Third green 218.100
CRR073308Third green 322.876
CRR073309Second white 113.043
CRR073310Second white 24.126
CRR073311Second white 34.067
CRR073312Silver flowering 12.305
CRR073313Silver flowering 22.957
CRR073314Silver flowering 33.671
CRR073315Gold flowering 13.136
CRR073316Gold flowering 21.620
CRR073317Gold flowering 30.772
CRR073318Tawny withering 10.000
CRR073319Tawny withering 21.266
CRR073320Tawny withering 30.000