Detail information of GWHGAAZE026793


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009760894.12.658E-104PREDICTED: uncharacterized protein LOC104213156 [Nicotiana sylvestris]
Swissprottr|Q9LJG8|ASIL2_ARATH1E-31Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|Q8W3M8|Q8W3M8_TOBAC5E-1026b-interacting protein 1 {ECO:0000313|EMBL:BAB83610.1}
TAIR10AT3G58630.18E-52sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1014325010144873+
GWHAAZE00000008mRNA1014325010144873+
GWHAAZE00000008exon1014325010144231+
GWHAAZE00000008exon1014464410144873+
GWHAAZE00000008CDS1014325010144231+
GWHAAZE00000008CDS1014464410144873+
Transcript Sequence

Network for GWHGAAZE026793

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4641581.30E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.483
SRR3591706second leaf6.943
SRR3591707mature leaf8.480
SRR3591708Shoot apex9.194
SRR3591709Stem9.492
SRR3591710White floral bud9.523
SRR3591711White flower7.378
SRR3591712Green floral bud10.845
SRR3591713Yellow flower6.980
SRP173429 SRR8316895Juvenile bud stage 5.670
SRR8316896Juvenile bud stage 9.294
SRR8316897Juvenile bud stage 2.785
SRR8316894Third green stage 2.727
SRR8316900Third green stage 9.724
SRR8316901Third green stage 11.430
SRR8316898Complete white stage 2.233
SRR8316899Complete white stage 10.591
SRR8316903Complete white stage 3.741
SRR8316902Silver flowering stage2.066
SRR8316904Silver flowering stage1.888
SRR8316905Silver flowering stage0.895
SRR8316906Gold flowering stage 3.442
SRR8316907Gold flowering stage 4.894
SRR8316908Gold flowering stage 3.873
SRP132670SRR6706286Control11.747
SRR6706287Light intensity 50%8.841
SRR6706288Light intensity 20%8.620
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.146
CNS0095593Slightly white alabastrum(diploid) 29.988
CNS0095594Slightly white alabastrum(diploid) 310.932
CNS0095595Whole white alabastrum(diploid) 210.368
CNS0095596Whole white alabastrum(diploid) 310.068
CNS0095597Whole white alabastrum(diploid) 412.117
CNS0095598Silvery flower (diploied) 18.390
CNS0095599Silvery flower (diploied) 28.511
CNS0095600Silvery flower (diploied) 38.183
CNS0095601Golden flower (diploid) 18.949
CNS0095602Golden flower (diploid) 210.600
CNS0095603Golden flower (diploid) 39.604
CNS0095604Slightly white alabastrum(tetraploid) 17.559
CNS0095605Slightly white alabastrum(tetraploid) 210.253
CNS0095606Slightly white alabastrum(tetraploid) 310.973
CNS0095607Whole white alabastrum(tetraploid) 17.938
CNS0095608Whole white alabastrum(tetraploid) 28.155
CNS0095609Whole white alabastrum(tetraploid) 39.586
CNS0095610Silvery flower (tetraploid) 17.687
CNS0095611Silvery flower (tetraploid) 27.410
CNS0095612Silvery flower (tetraploid) 36.225
CNS0095613Golden flower (tetraploid) 15.230
CNS0095614Golden flower (tetraploid) 26.647
CNS0095615Golden flower (tetraploid) 35.438
CRA001975CRR073297Stem 17.764
CRR073298Stem 27.607
CRR073299Stem 39.126
CRR073300Leaf 112.337
CRR073301Leaf 211.516
CRR073302Leaf 38.653
CRR073303Juvenile bud 18.886
CRR073304Juvenile bud 27.242
CRR073305Juvenile bud 313.719
CRR073306Third green 14.091
CRR073307Third green 23.909
CRR073308Third green 33.508
CRR073309Second white 16.314
CRR073310Second white 23.701
CRR073311Second white 34.420
CRR073312Silver flowering 13.551
CRR073313Silver flowering 28.186
CRR073314Silver flowering 38.161
CRR073315Gold flowering 16.587
CRR073316Gold flowering 28.915
CRR073317Gold flowering 35.742
CRR073318Tawny withering 17.930
CRR073319Tawny withering 29.301
CRR073320Tawny withering 39.170