Detail information of GWHGAAZE026555


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006349466.10PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Solanum tuberosum]
COGYP_004458607.11E-12group 1 glycosyl transferase
Swissprottr|Q9XEE9|ALG11_ARATH0GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
trEMBLtr|M1BNM4|M1BNM4_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400049380}
TAIR10AT2G40190.10UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene64382206443990-
GWHAAZE00000008mRNA64382206443990-
GWHAAZE00000008exon64436826443990-
GWHAAZE00000008exon64422036442489-
GWHAAZE00000008exon64413006441513-
GWHAAZE00000008exon64401716440364-
GWHAAZE00000008exon64387006438809-
GWHAAZE00000008exon64382206438586-
GWHAAZE00000008CDS64436826443990-
GWHAAZE00000008CDS64422036442489-
GWHAAZE00000008CDS64413006441513-
GWHAAZE00000008CDS64401716440364-
GWHAAZE00000008CDS64387006438809-
GWHAAZE00000008CDS64383486438586-
GWHAAZE00000008three_prime_UTR64382206438347-
Transcript Sequence

Network for GWHGAAZE026555

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15924.6ALG11_N372423.40E-88
PF00534.21Glycos_transf_12674239.10E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03844ALG11 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName
GO:0005789cellular_componentendoplasmic reticulum membrane
GO:0004377molecular_functionGDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.032
SRR3591706second leaf9.481
SRR3591707mature leaf9.912
SRR3591708Shoot apex13.091
SRR3591709Stem15.429
SRR3591710White floral bud17.091
SRR3591711White flower23.732
SRR3591712Green floral bud16.442
SRR3591713Yellow flower18.443
SRP173429 SRR8316895Juvenile bud stage 11.056
SRR8316896Juvenile bud stage 16.008
SRR8316897Juvenile bud stage 6.392
SRR8316894Third green stage 6.898
SRR8316900Third green stage 18.932
SRR8316901Third green stage 16.904
SRR8316898Complete white stage 9.247
SRR8316899Complete white stage 25.749
SRR8316903Complete white stage 13.084
SRR8316902Silver flowering stage8.080
SRR8316904Silver flowering stage12.363
SRR8316905Silver flowering stage6.034
SRR8316906Gold flowering stage 18.915
SRR8316907Gold flowering stage 18.331
SRR8316908Gold flowering stage 22.322
SRP132670SRR6706286Control15.807
SRR6706287Light intensity 50%15.921
SRR6706288Light intensity 20%17.298
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.479
CNS0095593Slightly white alabastrum(diploid) 212.935
CNS0095594Slightly white alabastrum(diploid) 312.189
CNS0095595Whole white alabastrum(diploid) 210.934
CNS0095596Whole white alabastrum(diploid) 310.519
CNS0095597Whole white alabastrum(diploid) 410.692
CNS0095598Silvery flower (diploied) 111.921
CNS0095599Silvery flower (diploied) 211.001
CNS0095600Silvery flower (diploied) 318.766
CNS0095601Golden flower (diploid) 111.159
CNS0095602Golden flower (diploid) 214.665
CNS0095603Golden flower (diploid) 317.299
CNS0095604Slightly white alabastrum(tetraploid) 115.470
CNS0095605Slightly white alabastrum(tetraploid) 216.733
CNS0095606Slightly white alabastrum(tetraploid) 324.686
CNS0095607Whole white alabastrum(tetraploid) 110.089
CNS0095608Whole white alabastrum(tetraploid) 29.405
CNS0095609Whole white alabastrum(tetraploid) 319.390
CNS0095610Silvery flower (tetraploid) 121.231
CNS0095611Silvery flower (tetraploid) 218.614
CNS0095612Silvery flower (tetraploid) 314.049
CNS0095613Golden flower (tetraploid) 111.950
CNS0095614Golden flower (tetraploid) 219.618
CNS0095615Golden flower (tetraploid) 315.766
CRA001975CRR073297Stem 115.344
CRR073298Stem 212.904
CRR073299Stem 39.407
CRR073300Leaf 113.350
CRR073301Leaf 215.372
CRR073302Leaf 311.372
CRR073303Juvenile bud 115.519
CRR073304Juvenile bud 210.761
CRR073305Juvenile bud 314.822
CRR073306Third green 17.357
CRR073307Third green 24.403
CRR073308Third green 37.620
CRR073309Second white 15.753
CRR073310Second white 26.498
CRR073311Second white 34.021
CRR073312Silver flowering 16.112
CRR073313Silver flowering 24.616
CRR073314Silver flowering 37.208
CRR073315Gold flowering 12.979
CRR073316Gold flowering 26.531
CRR073317Gold flowering 32.688
CRR073318Tawny withering 111.341
CRR073319Tawny withering 212.133
CRR073320Tawny withering 312.001