Detail information of GWHGAAZE026436


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI38625.30unnamed protein product [Vitis vinifera]
Swissprottr|Q9C8Z4|HEAT1_ARATH0Uncharacterized protein At3g06530
trEMBLtr|A0A0A0KUD6|A0A0A0KUD6_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN53163.1}
TAIR10AT3G06530.20ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene46407914663260-
GWHAAZE00000008mRNA46407914663260-
GWHAAZE00000008exon46630044663260-
GWHAAZE00000008exon46626924662905-
GWHAAZE00000008exon46624734662568-
GWHAAZE00000008exon46620774662194-
GWHAAZE00000008exon46617924661965-
GWHAAZE00000008exon46591504659320-
GWHAAZE00000008exon46583814658436-
GWHAAZE00000008exon46581724658261-
GWHAAZE00000008exon46579464658094-
GWHAAZE00000008exon46576894657771-
GWHAAZE00000008exon46574194657547-
GWHAAZE00000008exon46571444657218-
GWHAAZE00000008exon46556834655851-
GWHAAZE00000008exon46533314653470-
GWHAAZE00000008exon46530964653188-
GWHAAZE00000008exon46526204652800-
GWHAAZE00000008exon46522434652343-
GWHAAZE00000008exon46519894652141-
GWHAAZE00000008exon46514274651574-
GWHAAZE00000008exon46501974650330-
GWHAAZE00000008exon46499534650025-
GWHAAZE00000008exon46496864649848-
GWHAAZE00000008exon46494294649504-
GWHAAZE00000008exon46490694649242-
GWHAAZE00000008exon46489134648981-
GWHAAZE00000008exon46487124648816-
GWHAAZE00000008exon46483674648456-
GWHAAZE00000008exon46477304647941-
GWHAAZE00000008exon46474054647585-
GWHAAZE00000008exon46470844647266-
GWHAAZE00000008exon46466474646742-
GWHAAZE00000008exon46464704646537-
GWHAAZE00000008exon46460574646114-
GWHAAZE00000008exon46457934645825-
GWHAAZE00000008exon46445894644804-
GWHAAZE00000008exon46438494643984-
GWHAAZE00000008exon46434664643780-
GWHAAZE00000008exon46433324643399-
GWHAAZE00000008exon46425504642959-
GWHAAZE00000008exon46421844642367-
GWHAAZE00000008exon46412684641438-
GWHAAZE00000008exon46407914641021-
GWHAAZE00000008five_prime_UTR46631644663260-
GWHAAZE00000008CDS46630044663163-
GWHAAZE00000008CDS46626924662905-
GWHAAZE00000008CDS46624734662568-
GWHAAZE00000008CDS46620774662194-
GWHAAZE00000008CDS46617924661965-
GWHAAZE00000008CDS46591504659320-
GWHAAZE00000008CDS46583814658436-
GWHAAZE00000008CDS46581724658261-
GWHAAZE00000008CDS46579464658094-
GWHAAZE00000008CDS46576894657771-
GWHAAZE00000008CDS46574194657547-
GWHAAZE00000008CDS46571444657218-
GWHAAZE00000008CDS46556834655851-
GWHAAZE00000008CDS46533314653470-
GWHAAZE00000008CDS46530964653188-
GWHAAZE00000008CDS46526204652800-
GWHAAZE00000008CDS46522434652343-
GWHAAZE00000008CDS46519894652141-
GWHAAZE00000008CDS46514274651574-
GWHAAZE00000008CDS46501974650330-
GWHAAZE00000008CDS46499534650025-
GWHAAZE00000008CDS46496864649848-
GWHAAZE00000008CDS46494294649504-
GWHAAZE00000008CDS46490694649242-
GWHAAZE00000008CDS46489134648981-
GWHAAZE00000008CDS46487124648816-
GWHAAZE00000008CDS46483674648456-
GWHAAZE00000008CDS46477304647941-
GWHAAZE00000008CDS46474054647585-
GWHAAZE00000008CDS46470844647266-
GWHAAZE00000008CDS46466474646742-
GWHAAZE00000008CDS46464704646537-
GWHAAZE00000008CDS46460574646114-
GWHAAZE00000008CDS46457934645825-
GWHAAZE00000008CDS46445894644804-
GWHAAZE00000008CDS46438494643984-
GWHAAZE00000008CDS46434664643780-
GWHAAZE00000008CDS46433324643399-
GWHAAZE00000008CDS46425504642959-
GWHAAZE00000008CDS46421844642367-
GWHAAZE00000008CDS46412684641438-
GWHAAZE00000008CDS46407914641021-
Transcript Sequence

Network for GWHGAAZE026436

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12397.9U3snoRNP102313555.70E-22
PF08146.13BP28CT169218179.90E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14550UTP10, HEATR1 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.687
SRR3591706second leaf7.454
SRR3591707mature leaf8.964
SRR3591708Shoot apex14.321
SRR3591709Stem9.953
SRR3591710White floral bud10.710
SRR3591711White flower17.663
SRR3591712Green floral bud20.560
SRR3591713Yellow flower10.563
SRP173429 SRR8316895Juvenile bud stage 10.045
SRR8316896Juvenile bud stage 12.517
SRR8316897Juvenile bud stage 8.211
SRR8316894Third green stage 6.399
SRR8316900Third green stage 15.730
SRR8316901Third green stage 12.576
SRR8316898Complete white stage 1.111
SRR8316899Complete white stage 8.996
SRR8316903Complete white stage 4.589
SRR8316902Silver flowering stage2.910
SRR8316904Silver flowering stage5.702
SRR8316905Silver flowering stage1.752
SRR8316906Gold flowering stage 7.179
SRR8316907Gold flowering stage 6.002
SRR8316908Gold flowering stage 7.830
SRP132670SRR6706286Control6.936
SRR6706287Light intensity 50%8.267
SRR6706288Light intensity 20%9.773
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.546
CNS0095593Slightly white alabastrum(diploid) 26.583
CNS0095594Slightly white alabastrum(diploid) 36.039
CNS0095595Whole white alabastrum(diploid) 25.218
CNS0095596Whole white alabastrum(diploid) 34.991
CNS0095597Whole white alabastrum(diploid) 44.554
CNS0095598Silvery flower (diploied) 18.678
CNS0095599Silvery flower (diploied) 25.658
CNS0095600Silvery flower (diploied) 39.756
CNS0095601Golden flower (diploid) 17.011
CNS0095602Golden flower (diploid) 210.740
CNS0095603Golden flower (diploid) 310.385
CNS0095604Slightly white alabastrum(tetraploid) 17.637
CNS0095605Slightly white alabastrum(tetraploid) 26.286
CNS0095606Slightly white alabastrum(tetraploid) 319.073
CNS0095607Whole white alabastrum(tetraploid) 14.296
CNS0095608Whole white alabastrum(tetraploid) 23.415
CNS0095609Whole white alabastrum(tetraploid) 313.398
CNS0095610Silvery flower (tetraploid) 111.213
CNS0095611Silvery flower (tetraploid) 213.251
CNS0095612Silvery flower (tetraploid) 37.030
CNS0095613Golden flower (tetraploid) 13.559
CNS0095614Golden flower (tetraploid) 28.269
CNS0095615Golden flower (tetraploid) 37.114
CRA001975CRR073297Stem 110.451
CRR073298Stem 29.375
CRR073299Stem 34.886
CRR073300Leaf 110.209
CRR073301Leaf 27.331
CRR073302Leaf 34.390
CRR073303Juvenile bud 14.870
CRR073304Juvenile bud 21.866
CRR073305Juvenile bud 36.967
CRR073306Third green 10.143
CRR073307Third green 20.170
CRR073308Third green 30.565
CRR073309Second white 10.749
CRR073310Second white 21.605
CRR073311Second white 32.599
CRR073312Silver flowering 11.406
CRR073313Silver flowering 22.336
CRR073314Silver flowering 30.921
CRR073315Gold flowering 11.817
CRR073316Gold flowering 24.358
CRR073317Gold flowering 31.539
CRR073318Tawny withering 15.000
CRR073319Tawny withering 24.852
CRR073320Tawny withering 34.783