Detail information of GWHGAAZE026429


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003527555.11.29187E-61PREDICTED: derlin-1-like [Glycine max]
Swissprottr|Q8VZU9|DERL1_ARATH1E-56Derlin-1
trEMBLtr|K7KYJ8|K7KYJ8_SOYBN2E-63Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G47560.2}
TAIR10AT4G29330.12E-46DERLIN-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene45645844566199+
GWHAAZE00000008mRNA45645844566199+
GWHAAZE00000008exon45645844564676+
GWHAAZE00000008exon45647884564916+
GWHAAZE00000008exon45660174566199+
GWHAAZE00000008CDS45645844564676+
GWHAAZE00000008CDS45647884564916+
GWHAAZE00000008CDS45660174566199+
Transcript Sequence

Network for GWHGAAZE026429

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04511.16DER161253.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13989DERL2_3 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.034
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.167
SRR8316900Third green stage 0.428
SRR8316901Third green stage 0.574
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.128
SRR8316903Complete white stage 0.104
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.136
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.306
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.235
SRR6706287Light intensity 50%0.103
SRR6706288Light intensity 20%0.098
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.303
CNS0095593Slightly white alabastrum(diploid) 20.041
CNS0095594Slightly white alabastrum(diploid) 30.356
CNS0095595Whole white alabastrum(diploid) 21.016
CNS0095596Whole white alabastrum(diploid) 30.129
CNS0095597Whole white alabastrum(diploid) 40.165
CNS0095598Silvery flower (diploied) 10.053
CNS0095599Silvery flower (diploied) 21.222
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.022
CNS0095602Golden flower (diploid) 20.368
CNS0095603Golden flower (diploid) 30.597
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.136
CNS0095608Whole white alabastrum(tetraploid) 20.221
CNS0095609Whole white alabastrum(tetraploid) 30.488
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.123
CNS0095612Silvery flower (tetraploid) 30.139
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.043
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.040
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.041
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.130
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.594
CRR073316Gold flowering 21.545
CRR073317Gold flowering 31.611
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.021
CRR073320Tawny withering 30.000