Detail information of GWHGAAZE026166


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010278052.10PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Nelumbo nucifera]
COGYP_005071944.11E-19cyclic nucleotide-binding protein
Swissprottr|Q8L7Z0|CNG17_ARATH0Probable cyclic nucleotide-gated ion channel 17
trEMBLtr|I1K951|I1K951_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08170.1}
TAIR10AT4G30360.17E-164cyclic nucleotide-gated channel 17

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7471390974716573-
GWHAAZE00000007mRNA7471390974716573-
GWHAAZE00000007exon7471390974714631-
GWHAAZE00000007exon7471471074714946-
GWHAAZE00000007exon7471548174715592-
GWHAAZE00000007exon7471656674716573-
GWHAAZE00000007CDS7471656674716573-
GWHAAZE00000007CDS7471548174715592-
GWHAAZE00000007CDS7471471074714946-
GWHAAZE00000007CDS7471390974714631-
Transcript Sequence

Network for GWHGAAZE026166

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00027.30cNMP_binding1452342.40E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05391CNGC Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.600
SRR3591706second leaf22.190
SRR3591707mature leaf29.590
SRR3591708Shoot apex19.431
SRR3591709Stem26.444
SRR3591710White floral bud33.618
SRR3591711White flower33.179
SRR3591712Green floral bud41.548
SRR3591713Yellow flower22.538
SRP173429 SRR8316895Juvenile bud stage 18.948
SRR8316896Juvenile bud stage 26.825
SRR8316897Juvenile bud stage 8.842
SRR8316894Third green stage 12.057
SRR8316900Third green stage 38.411
SRR8316901Third green stage 35.327
SRR8316898Complete white stage 17.615
SRR8316899Complete white stage 62.432
SRR8316903Complete white stage 25.092
SRR8316902Silver flowering stage13.806
SRR8316904Silver flowering stage16.294
SRR8316905Silver flowering stage8.915
SRR8316906Gold flowering stage 27.978
SRR8316907Gold flowering stage 25.493
SRR8316908Gold flowering stage 19.107
SRP132670SRR6706286Control41.796
SRR6706287Light intensity 50%46.074
SRR6706288Light intensity 20%47.333
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.270
CNS0095593Slightly white alabastrum(diploid) 232.882
CNS0095594Slightly white alabastrum(diploid) 326.178
CNS0095595Whole white alabastrum(diploid) 222.226
CNS0095596Whole white alabastrum(diploid) 320.641
CNS0095597Whole white alabastrum(diploid) 427.766
CNS0095598Silvery flower (diploied) 133.176
CNS0095599Silvery flower (diploied) 221.560
CNS0095600Silvery flower (diploied) 324.137
CNS0095601Golden flower (diploid) 124.415
CNS0095602Golden flower (diploid) 223.952
CNS0095603Golden flower (diploid) 323.128
CNS0095604Slightly white alabastrum(tetraploid) 127.249
CNS0095605Slightly white alabastrum(tetraploid) 222.696
CNS0095606Slightly white alabastrum(tetraploid) 351.061
CNS0095607Whole white alabastrum(tetraploid) 118.355
CNS0095608Whole white alabastrum(tetraploid) 216.812
CNS0095609Whole white alabastrum(tetraploid) 326.130
CNS0095610Silvery flower (tetraploid) 118.297
CNS0095611Silvery flower (tetraploid) 220.718
CNS0095612Silvery flower (tetraploid) 327.228
CNS0095613Golden flower (tetraploid) 111.598
CNS0095614Golden flower (tetraploid) 215.614
CNS0095615Golden flower (tetraploid) 312.412
CRA001975CRR073297Stem 139.879
CRR073298Stem 236.233
CRR073299Stem 327.209
CRR073300Leaf 160.726
CRR073301Leaf 260.908
CRR073302Leaf 341.088
CRR073303Juvenile bud 148.385
CRR073304Juvenile bud 234.648
CRR073305Juvenile bud 363.689
CRR073306Third green 147.022
CRR073307Third green 236.396
CRR073308Third green 343.099
CRR073309Second white 126.919
CRR073310Second white 226.648
CRR073311Second white 326.008
CRR073312Silver flowering 116.598
CRR073313Silver flowering 214.990
CRR073314Silver flowering 314.091
CRR073315Gold flowering 114.657
CRR073316Gold flowering 224.643
CRR073317Gold flowering 319.633
CRR073318Tawny withering 125.389
CRR073319Tawny withering 222.561
CRR073320Tawny withering 326.737