Gene detail

Detail information of GWHGAAZE026151

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDO40412.1	3.66319E-85	hypothetical protein CISIN_1g013734mg [Citrus sinensis]
trEMBL	tr\|A0A067DN25\|A0A067DN25_CITSI	1E-85	Uncharacterized protein {ECO:0000313\|EMBL:KDO40412.1}
TAIR10	AT4G19410.1	2E-66	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	74320503	74325580	+
GWHAAZE00000007	mRNA	74320503	74325580	+
GWHAAZE00000007	exon	74320503	74320686	+
GWHAAZE00000007	exon	74320914	74320984	+
GWHAAZE00000007	exon	74321243	74321369	+
GWHAAZE00000007	exon	74322016	74322085	+
GWHAAZE00000007	exon	74322450	74322549	+
GWHAAZE00000007	exon	74323449	74323535	+
GWHAAZE00000007	exon	74323640	74323764	+
GWHAAZE00000007	exon	74323929	74323989	+
GWHAAZE00000007	exon	74324109	74324165	+
GWHAAZE00000007	exon	74324453	74324555	+
GWHAAZE00000007	exon	74324959	74325107	+
GWHAAZE00000007	exon	74325437	74325580	+
GWHAAZE00000007	CDS	74320503	74320686	+
GWHAAZE00000007	CDS	74320914	74320984	+
GWHAAZE00000007	CDS	74321243	74321369	+
GWHAAZE00000007	CDS	74322016	74322085	+
GWHAAZE00000007	CDS	74322450	74322549	+
GWHAAZE00000007	CDS	74323449	74323535	+
GWHAAZE00000007	CDS	74323640	74323764	+
GWHAAZE00000007	CDS	74323929	74323989	+
GWHAAZE00000007	CDS	74324109	74324165	+
GWHAAZE00000007	CDS	74324453	74324555	+
GWHAAZE00000007	CDS	74324959	74325107	+
GWHAAZE00000007	CDS	74325437	74325580	+

Transcript Sequence
>GWHTAAZE026185 TCGAAGAAATTAATTCAAAGCAAGAAAGGGGAAGGTATCTCTTTAATGGCCAGAATGGAGAGTGGAAGAGTAGGCAAATGTGTATGTGTATTGATTTTCACCATCGCCATCACCTTCCTGAAAATACAAGCAAGTTCAGATGTGGAAATTACTCTGGTTGAGAATGCTGTTGAAAGGAGAGCAGTCTGCTTGGATGGAAGTGCTCCTGCCTATCAATTTGATAAAGGCAGGGGAAAAGGAGTTAAAAATTGGTTGGGAGGACAATGGTGTGAATCCAGAGAGAAATGCGCCAGGCGTGCCAAAACCAACATGGGTTCCTCCCATCGTATGCAAAAGCTGGGTTTCACTGGCATGATGAGCAACAACAGGACTACAAACTCTAACGGAACGGCGGTAACGGCGATGACGGGAGTCGACGGAACGGCGATGACGGGAGCCGACGGAACGGCGAGAGAGAAACTGAAGTTTCAATATGAGAGGCGAGAGGTTTCCGCGGATGTCGTCGGAACGGCTGTGGTCAAGGAGAACGGCAGCGAATACGGCGTGGCGGTGCCTTCGAAGCTTCACTTGAGAGGTGCATGGGTGTTTGATGCAGTTATGGACCATCTTTTAGCACAAGGGATGGCCAAGGCATCAAATGTTCTTCTTTCTGGTTGTTCTGCTGGGGGATTAGCCACGATACTGCACTGTGACAAATTTCGTGCGCTTTTTCCCCCTACTACCAGAGTAAAATGTTTGTCAGATGGCGGCTATTTTCTCCACACAAAAGATGCAGCTGGAGGATATCGTTTTGCCAAAGTATTTCGGAGATTGGCCGACTTACATGAATCGGCCAAGAATTTGCCAGTGTCTTGCACTTCAAAGATGAAACGGCCGGGTTTGATATCAAACGTTTTGGCCGCAGGACAAGTTGGCCAAAATGGGTCATGGGTGAAATGCCAGTTTGATATAGGGTGCACGGCTCAACAAATCAAGTCCCTGATAGATTTCAGGAAAAAAATTATGCGGAAAGTATTGAATAAGCTGGATAATTTGTGGACCAGAGGAGCTTTTATCAATACTTGTCATACCCATTGCCAGTCTCTGTTTCAGCCCAAATGGTCTGGATATCCCGACTCAAAGTTACATAAAAAGGCCATTGGAAAGGCCGTTGGTGATTGGTTTTACGAGCGGAAAAGAGTCCAACTCGTAGACAAGAGGCATGGGCTTCCGCATTGGTGTGCACCTTATGATCCCAGTGAACCCAACCCGAATAATAACTATACATGGGGTTCTTAG

Network for GWHGAAZE026151

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	43	127	3.70E-25
PF03283.14	PAE	186	291	2.80E-37
PF03283.14	PAE	295	393	2.40E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.299
	SRR3591706	second leaf	0.011
	SRR3591707	mature leaf	0.028
	SRR3591708	Shoot apex	0.220
	SRR3591709	Stem	0.084
	SRR3591710	White floral bud	0.400
	SRR3591711	White flower	0.242
	SRR3591712	Green floral bud	0.626
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.297
	SRR8316896	Juvenile bud stage	0.078
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.078
	SRR8316900	Third green stage	0.457
	SRR8316901	Third green stage	0.770
	SRR8316898	Complete white stage	0.013
	SRR8316899	Complete white stage	0.276
	SRR8316903	Complete white stage	0.114
	SRR8316902	Silver flowering stage	0.006
	SRR8316904	Silver flowering stage	0.026
	SRR8316905	Silver flowering stage	0.021
	SRR8316906	Gold flowering stage	0.014
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.749
	SRR6706287	Light intensity 50%	0.776
	SRR6706288	Light intensity 20%	1.189
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.017
	CNS0095593	Slightly white alabastrum(diploid) 2	1.225
	CNS0095594	Slightly white alabastrum(diploid) 3	0.494
	CNS0095595	Whole white alabastrum(diploid) 2	0.707
	CNS0095596	Whole white alabastrum(diploid) 3	0.579
	CNS0095597	Whole white alabastrum(diploid) 4	1.122
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.088
	CNS0095601	Golden flower (diploid) 1	0.011
	CNS0095602	Golden flower (diploid) 2	0.041
	CNS0095603	Golden flower (diploid) 3	0.046
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.523
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.665
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.963
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.257
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.077
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.165
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.034
	CNS0095612	Silvery flower (tetraploid) 3	0.039
	CNS0095613	Golden flower (tetraploid) 1	0.024
	CNS0095614	Golden flower (tetraploid) 2	0.016
	CNS0095615	Golden flower (tetraploid) 3	0.042
CRA001975	CRR073297	Stem 1	0.591
	CRR073298	Stem 2	0.255
	CRR073299	Stem 3	0.253
	CRR073300	Leaf 1	0.749
	CRR073301	Leaf 2	0.846
	CRR073302	Leaf 3	0.717
	CRR073303	Juvenile bud 1	1.327
	CRR073304	Juvenile bud 2	0.633
	CRR073305	Juvenile bud 3	1.350
	CRR073306	Third green 1	0.093
	CRR073307	Third green 2	0.014
	CRR073308	Third green 3	0.029
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.007
	CRR073311	Second white 3	0.010
	CRR073312	Silver flowering 1	0.069
	CRR073313	Silver flowering 2	0.058
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.025
	CRR073318	Tawny withering 1	0.052
	CRR073319	Tawny withering 2	0.027
	CRR073320	Tawny withering 3	0.000