Detail information of GWHGAAZE026119


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283410.20PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Vitis vinifera]
COGYP_005440390.16E-118monogalactosyldiacylglycerol synthase family protein
Swissprottr|Q9SM44|MGDG_SPIOL0Monogalactosyldiacylglycerol synthase, chloroplastic (Precursor)
trEMBLtr|F6H352|F6H352_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46881.1}
TAIR10AT4G31780.20monogalactosyl diacylglycerol synthase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7372853773733891-
GWHAAZE00000007mRNA7372853773733891-
GWHAAZE00000007exon7372853773728773-
GWHAAZE00000007exon7372964573729719-
GWHAAZE00000007exon7372980573729867-
GWHAAZE00000007exon7373014673730370-
GWHAAZE00000007exon7373195173732092-
GWHAAZE00000007exon7373218573732346-
GWHAAZE00000007exon7373310273733274-
GWHAAZE00000007exon7373340373733891-
GWHAAZE00000007CDS7373340373733891-
GWHAAZE00000007CDS7373310273733274-
GWHAAZE00000007CDS7373218573732346-
GWHAAZE00000007CDS7373195173732092-
GWHAAZE00000007CDS7373014673730370-
GWHAAZE00000007CDS7372980573729867-
GWHAAZE00000007CDS7372964573729719-
GWHAAZE00000007CDS7372853773728773-
Transcript Sequence

Network for GWHGAAZE026119

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06925.12MGDG_synth1433112.60E-60
PF04101.17Glyco_tran_28_C3714625.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03715MGD Metabolic pathways map01100
Glycerolipid metabolismmap00561

Gene Ontology

GO term OntologyName
GO:0009247biological_processglycolipid biosynthetic process
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.070
SRR3591706second leaf18.375
SRR3591707mature leaf8.050
SRR3591708Shoot apex23.158
SRR3591709Stem8.588
SRR3591710White floral bud53.126
SRR3591711White flower36.236
SRR3591712Green floral bud18.039
SRR3591713Yellow flower34.100
SRP173429 SRR8316895Juvenile bud stage 9.526
SRR8316896Juvenile bud stage 8.609
SRR8316897Juvenile bud stage 5.994
SRR8316894Third green stage 5.733
SRR8316900Third green stage 15.581
SRR8316901Third green stage 13.273
SRR8316898Complete white stage 40.807
SRR8316899Complete white stage 40.991
SRR8316903Complete white stage 57.158
SRR8316902Silver flowering stage30.518
SRR8316904Silver flowering stage28.458
SRR8316905Silver flowering stage14.462
SRR8316906Gold flowering stage 55.553
SRR8316907Gold flowering stage 56.060
SRR8316908Gold flowering stage 59.597
SRP132670SRR6706286Control10.667
SRR6706287Light intensity 50%12.878
SRR6706288Light intensity 20%12.856
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.618
CNS0095593Slightly white alabastrum(diploid) 29.215
CNS0095594Slightly white alabastrum(diploid) 37.425
CNS0095595Whole white alabastrum(diploid) 27.492
CNS0095596Whole white alabastrum(diploid) 37.616
CNS0095597Whole white alabastrum(diploid) 48.053
CNS0095598Silvery flower (diploied) 118.053
CNS0095599Silvery flower (diploied) 221.872
CNS0095600Silvery flower (diploied) 328.705
CNS0095601Golden flower (diploid) 119.697
CNS0095602Golden flower (diploid) 223.864
CNS0095603Golden flower (diploid) 322.659
CNS0095604Slightly white alabastrum(tetraploid) 18.681
CNS0095605Slightly white alabastrum(tetraploid) 28.371
CNS0095606Slightly white alabastrum(tetraploid) 319.281
CNS0095607Whole white alabastrum(tetraploid) 15.029
CNS0095608Whole white alabastrum(tetraploid) 24.991
CNS0095609Whole white alabastrum(tetraploid) 310.731
CNS0095610Silvery flower (tetraploid) 122.951
CNS0095611Silvery flower (tetraploid) 218.717
CNS0095612Silvery flower (tetraploid) 3113.063
CNS0095613Golden flower (tetraploid) 136.123
CNS0095614Golden flower (tetraploid) 223.481
CNS0095615Golden flower (tetraploid) 326.538
CRA001975CRR073297Stem 18.961
CRR073298Stem 28.766
CRR073299Stem 38.857
CRR073300Leaf 110.217
CRR073301Leaf 213.029
CRR073302Leaf 311.938
CRR073303Juvenile bud 111.928
CRR073304Juvenile bud 231.845
CRR073305Juvenile bud 315.911
CRR073306Third green 1106.620
CRR073307Third green 274.016
CRR073308Third green 379.823
CRR073309Second white 1113.618
CRR073310Second white 2129.108
CRR073311Second white 3100.748
CRR073312Silver flowering 197.196
CRR073313Silver flowering 292.839
CRR073314Silver flowering 388.266
CRR073315Gold flowering 18.274
CRR073316Gold flowering 27.712
CRR073317Gold flowering 36.892
CRR073318Tawny withering 115.532
CRR073319Tawny withering 234.219
CRR073320Tawny withering 39.660