Detail information of GWHGAAZE026098


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011081968.10PREDICTED: phospholipase D Z-like [Sesamum indicum]
COGNP_901382.11E-12phospholipase D/ transphosphatidylase
trEMBLtr|A5AJI2|A5AJI2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN82248.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7341764873423029-
GWHAAZE00000007mRNA7341764873423029-
GWHAAZE00000007exon7342284273423029-
GWHAAZE00000007exon7342230173422502-
GWHAAZE00000007exon7342037373420566-
GWHAAZE00000007exon7341946973419622-
GWHAAZE00000007exon7341886573419029-
GWHAAZE00000007exon7341764873418109-
GWHAAZE00000007CDS7342284273423029-
GWHAAZE00000007CDS7342230173422502-
GWHAAZE00000007CDS7342037373420566-
GWHAAZE00000007CDS7341946973419622-
GWHAAZE00000007CDS7341886573419029-
GWHAAZE00000007CDS7341764873418109-
Transcript Sequence

Network for GWHGAAZE026098

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13091.7PLDc_2481566.00E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16860PLD3_4 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.538
SRR3591706second leaf6.525
SRR3591707mature leaf6.549
SRR3591708Shoot apex6.611
SRR3591709Stem4.904
SRR3591710White floral bud8.541
SRR3591711White flower9.983
SRR3591712Green floral bud8.621
SRR3591713Yellow flower8.321
SRP173429 SRR8316895Juvenile bud stage 6.150
SRR8316896Juvenile bud stage 8.419
SRR8316897Juvenile bud stage 2.381
SRR8316894Third green stage 4.460
SRR8316900Third green stage 8.809
SRR8316901Third green stage 9.296
SRR8316898Complete white stage 5.029
SRR8316899Complete white stage 13.761
SRR8316903Complete white stage 6.532
SRR8316902Silver flowering stage7.681
SRR8316904Silver flowering stage11.315
SRR8316905Silver flowering stage7.320
SRR8316906Gold flowering stage 20.524
SRR8316907Gold flowering stage 16.574
SRR8316908Gold flowering stage 19.532
SRP132670SRR6706286Control8.946
SRR6706287Light intensity 50%8.846
SRR6706288Light intensity 20%8.421
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.941
CNS0095593Slightly white alabastrum(diploid) 24.320
CNS0095594Slightly white alabastrum(diploid) 37.600
CNS0095595Whole white alabastrum(diploid) 24.934
CNS0095596Whole white alabastrum(diploid) 33.326
CNS0095597Whole white alabastrum(diploid) 44.007
CNS0095598Silvery flower (diploied) 15.580
CNS0095599Silvery flower (diploied) 22.976
CNS0095600Silvery flower (diploied) 37.635
CNS0095601Golden flower (diploid) 13.405
CNS0095602Golden flower (diploid) 26.216
CNS0095603Golden flower (diploid) 36.503
CNS0095604Slightly white alabastrum(tetraploid) 15.384
CNS0095605Slightly white alabastrum(tetraploid) 23.980
CNS0095606Slightly white alabastrum(tetraploid) 38.246
CNS0095607Whole white alabastrum(tetraploid) 13.342
CNS0095608Whole white alabastrum(tetraploid) 21.919
CNS0095609Whole white alabastrum(tetraploid) 35.243
CNS0095610Silvery flower (tetraploid) 17.555
CNS0095611Silvery flower (tetraploid) 27.369
CNS0095612Silvery flower (tetraploid) 36.827
CNS0095613Golden flower (tetraploid) 16.817
CNS0095614Golden flower (tetraploid) 26.892
CNS0095615Golden flower (tetraploid) 34.605
CRA001975CRR073297Stem 110.096
CRR073298Stem 28.060
CRR073299Stem 37.985
CRR073300Leaf 18.376
CRR073301Leaf 29.116
CRR073302Leaf 37.292
CRR073303Juvenile bud 17.224
CRR073304Juvenile bud 28.544
CRR073305Juvenile bud 39.317
CRR073306Third green 17.734
CRR073307Third green 26.767
CRR073308Third green 38.927
CRR073309Second white 17.660
CRR073310Second white 26.478
CRR073311Second white 39.328
CRR073312Silver flowering 16.393
CRR073313Silver flowering 23.617
CRR073314Silver flowering 37.424
CRR073315Gold flowering 16.912
CRR073316Gold flowering 26.032
CRR073317Gold flowering 36.447
CRR073318Tawny withering 16.865
CRR073319Tawny withering 28.118
CRR073320Tawny withering 38.137