Gene detail

Detail information of GWHGAAZE025955

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP34220.1	0	hypothetical protein JCGZ_07791 [Jatropha curcas]
COG	NP_108142.1	1E-76	dimethylaniline monooxygenase
Swissprot	tr\|Q8VZ59\|YUC6_ARATH	0	Indole-3-pyruvate monooxygenase YUCCA6
trEMBL	tr\|A0A067KPN3\|A0A067KPN3_JATCU	0	Flavin-containing monooxygenase {ECO:0000256\|RuleBase:RU361177}
TAIR10	AT5G25620.1	5E-169	Flavin-binding monooxygenase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	70750769	70754667	-
GWHAAZE00000007	mRNA	70750769	70754667	-
GWHAAZE00000007	exon	70750769	70750987	-
GWHAAZE00000007	exon	70751572	70751694	-
GWHAAZE00000007	exon	70752268	70752516	-
GWHAAZE00000007	exon	70753984	70754667	-
GWHAAZE00000007	CDS	70753984	70754667	-
GWHAAZE00000007	CDS	70752268	70752516	-
GWHAAZE00000007	CDS	70751572	70751694	-
GWHAAZE00000007	CDS	70750769	70750987	-

Transcript Sequence
>GWHTAAZE025989 ATGAAATATTCGAGCGAAACCGAGGGCAAAATGGTCCACGACCCGCGTGGCAACGACAAAACCCACCGGCCCCGGCGGTGCGTTTTCGTGCCGGGGCCTGTGATCGTCGGAGCGGGGCCCTCCGGTTTAGCCGTGGCGGCGTGCTTAAAACAGCGAGGGGTACCGAGTGTAATTTTGGAGAGATCGAATTGCATAGCGTCTCTGTGGCAACTCAAAACATATGATCGATTAAGCTTGCATTTACCAAAGCAATTCTGTGAACTTCCATTAATGCCCTTCCCTGACAATTTCCCAACTTACCCTTCAAAGCAGCAGTTTATTGAGTACCTCGAGGGGTACGCTGAGAGATTTGGGATATTTCCGGTTTTCGAGGAGGAGGTGGCGCGTGCGGAGTACCAAGGGGGTTGGTGGCGCGTGAGGAGCAAGGGTAAGGGGGGAGGGGAGGTGGAGTACGTGAGCAGGTGGTTGGTTGTTGCAACGGGGGAGAATGCAGAGGCGGTGGTGCCGGAGATAGAGGGGATGAGGGAGTTTGGAGGGGAGGTGAAGCACACGTGCGAATACAAGAGTGGGGTTGTGTTTGAAGGGAAGAGGGTGTTGGTGGTTGGATGTGGGAATTCGGGCATGGAGGTATGTTTGGACCTGTGTAATCATAATGCTAGCCCTTCTCTTGTGGTTCGTGATGCTGTACATGTCCTGCCACGAGAGATGTTGGGAAAATCAACTTTCGGACTGTCCATGTGGTTGCTCAAGTGGCTACCAATGCGTCTTGTGGACCGCATCCTCCTTATCGCGTCTAGGCTCTTGTTAGGTGACACAGCTAGGGTTGGCTTAACCAGGCCTCGATTAGGGCCCCTAGAGCTTAAAAACATAGCTGGAAAGACACCGGTCCTCGACGTAGGAACCCTGGCCAAGATAAAAAGTGGAGACATCAAGATATATCCGAGCATTAGGCGTTTAACAAGAGGGGTAGTAGAATTTATGGATGGGCGAGAAGTAGATTTTGATGCAATCATCCTTGCAACTGGCTACAAAAGCAATGTACCCTCTTGGCTAAAGGAGAGAGAGATGTTTTCGGAGAAAGATGGACTACCTAGAAGACCATTTCCAAATGGGTGGAAAGGCGAGTGTGGGCTATATGCGGTAGGGTTTACTAAGCGTGGCTTGCTTGGTACATCAATGGATGCTAAGAGAATCGCTGAAGACATTGAACGGTGTTGGAGAACCGAGGCAAAGCATCTAACGGCGGTGGCGCACTCGTTTTCATTGCAAACCTAG

Network for GWHGAAZE025955

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00743.20	FMO-like	35	348	3.70E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11816	YUCCA	Metabolic pathways	map01100
K11816	YUCCA	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0004499	molecular_function	N,N-dimethylaniline monooxygenase activity
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0050661	molecular_function	NADP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.548
	SRR3591706	second leaf	2.233
	SRR3591707	mature leaf	1.409
	SRR3591708	Shoot apex	1.413
	SRR3591709	Stem	0.066
	SRR3591710	White floral bud	1.579
	SRR3591711	White flower	0.321
	SRR3591712	Green floral bud	1.785
	SRR3591713	Yellow flower	0.082
SRP173429	SRR8316895	Juvenile bud stage	0.118
	SRR8316896	Juvenile bud stage	0.415
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.571
	SRR8316900	Third green stage	2.709
	SRR8316901	Third green stage	2.310
	SRR8316898	Complete white stage	0.940
	SRR8316899	Complete white stage	3.533
	SRR8316903	Complete white stage	1.228
	SRR8316902	Silver flowering stage	0.421
	SRR8316904	Silver flowering stage	0.594
	SRR8316905	Silver flowering stage	0.207
	SRR8316906	Gold flowering stage	0.299
	SRR8316907	Gold flowering stage	0.264
	SRR8316908	Gold flowering stage	0.529
SRP132670	SRR6706286	Control	2.274
	SRR6706287	Light intensity 50%	2.933
	SRR6706288	Light intensity 20%	3.203
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.311
	CNS0095593	Slightly white alabastrum(diploid) 2	1.036
	CNS0095594	Slightly white alabastrum(diploid) 3	0.092
	CNS0095595	Whole white alabastrum(diploid) 2	0.419
	CNS0095596	Whole white alabastrum(diploid) 3	0.352
	CNS0095597	Whole white alabastrum(diploid) 4	0.156
	CNS0095598	Silvery flower (diploied) 1	0.089
	CNS0095599	Silvery flower (diploied) 2	0.333
	CNS0095600	Silvery flower (diploied) 3	0.714
	CNS0095601	Golden flower (diploid) 1	0.343
	CNS0095602	Golden flower (diploid) 2	0.070
	CNS0095603	Golden flower (diploid) 3	0.032
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.158
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.431
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.196
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.095
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.585
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.320
	CNS0095610	Silvery flower (tetraploid) 1	0.566
	CNS0095611	Silvery flower (tetraploid) 2	0.454
	CNS0095612	Silvery flower (tetraploid) 3	1.277
	CNS0095613	Golden flower (tetraploid) 1	0.117
	CNS0095614	Golden flower (tetraploid) 2	0.416
	CNS0095615	Golden flower (tetraploid) 3	0.227
CRA001975	CRR073297	Stem 1	2.070
	CRR073298	Stem 2	2.457
	CRR073299	Stem 3	2.674
	CRR073300	Leaf 1	3.582
	CRR073301	Leaf 2	3.359
	CRR073302	Leaf 3	2.890
	CRR073303	Juvenile bud 1	5.637
	CRR073304	Juvenile bud 2	2.119
	CRR073305	Juvenile bud 3	6.145
	CRR073306	Third green 1	5.593
	CRR073307	Third green 2	5.505
	CRR073308	Third green 3	4.765
	CRR073309	Second white 1	0.423
	CRR073310	Second white 2	0.629
	CRR073311	Second white 3	0.265
	CRR073312	Silver flowering 1	0.345
	CRR073313	Silver flowering 2	0.948
	CRR073314	Silver flowering 3	0.243
	CRR073315	Gold flowering 1	3.947
	CRR073316	Gold flowering 2	1.772
	CRR073317	Gold flowering 3	1.742
	CRR073318	Tawny withering 1	0.130
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.519