Detail information of GWHGAAZE025924


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010254032.10PREDICTED: probable lactoylglutathione lyase, chloroplast [Nelumbo nucifera]
COGYP_004421008.11E-47glyoxalase I
Swissprottr|Q8W593|LGUC_ARATH0Probable lactoylglutathione lyase, chloroplast (Precursor)
trEMBLtr|A0A067GWJ2|A0A067GWJ2_CITSI0Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}
TAIR10AT1G67280.14E-144Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7037664570381304-
GWHAAZE00000007mRNA7037664570381304-
GWHAAZE00000007exon7037664570376706-
GWHAAZE00000007exon7037680370376893-
GWHAAZE00000007exon7037705870377165-
GWHAAZE00000007exon7037813070378177-
GWHAAZE00000007exon7037851470378726-
GWHAAZE00000007exon7037996470380028-
GWHAAZE00000007exon7038019670380320-
GWHAAZE00000007exon7038040770380611-
GWHAAZE00000007exon7038110970381304-
GWHAAZE00000007CDS7038110970381304-
GWHAAZE00000007CDS7038040770380611-
GWHAAZE00000007CDS7038019670380320-
GWHAAZE00000007CDS7037996470380028-
GWHAAZE00000007CDS7037851470378726-
GWHAAZE00000007CDS7037813070378177-
GWHAAZE00000007CDS7037705870377165-
GWHAAZE00000007CDS7037680370376893-
GWHAAZE00000007CDS7037664570376706-
Transcript Sequence

Network for GWHGAAZE025924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00903.26Glyoxalase1192391.80E-22
PF00903.26Glyoxalase2513652.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01759GLO1, gloA Metabolic pathways map01100
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0004462molecular_functionlactoylglutathione lyase activity
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.884
SRR3591706second leaf85.515
SRR3591707mature leaf53.675
SRR3591708Shoot apex45.225
SRR3591709Stem16.451
SRR3591710White floral bud17.082
SRR3591711White flower15.463
SRR3591712Green floral bud22.029
SRR3591713Yellow flower8.744
SRP173429 SRR8316895Juvenile bud stage 21.813
SRR8316896Juvenile bud stage 26.691
SRR8316897Juvenile bud stage 13.178
SRR8316894Third green stage 12.600
SRR8316900Third green stage 49.959
SRR8316901Third green stage 48.736
SRR8316898Complete white stage 21.718
SRR8316899Complete white stage 51.771
SRR8316903Complete white stage 30.820
SRR8316902Silver flowering stage18.203
SRR8316904Silver flowering stage24.198
SRR8316905Silver flowering stage10.474
SRR8316906Gold flowering stage 39.226
SRR8316907Gold flowering stage 35.839
SRR8316908Gold flowering stage 40.744
SRP132670SRR6706286Control47.090
SRR6706287Light intensity 50%45.362
SRR6706288Light intensity 20%47.908
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.546
CNS0095593Slightly white alabastrum(diploid) 217.756
CNS0095594Slightly white alabastrum(diploid) 316.257
CNS0095595Whole white alabastrum(diploid) 228.976
CNS0095596Whole white alabastrum(diploid) 328.337
CNS0095597Whole white alabastrum(diploid) 427.171
CNS0095598Silvery flower (diploied) 127.809
CNS0095599Silvery flower (diploied) 232.695
CNS0095600Silvery flower (diploied) 338.468
CNS0095601Golden flower (diploid) 130.301
CNS0095602Golden flower (diploid) 232.398
CNS0095603Golden flower (diploid) 324.215
CNS0095604Slightly white alabastrum(tetraploid) 121.709
CNS0095605Slightly white alabastrum(tetraploid) 220.813
CNS0095606Slightly white alabastrum(tetraploid) 333.703
CNS0095607Whole white alabastrum(tetraploid) 120.040
CNS0095608Whole white alabastrum(tetraploid) 227.859
CNS0095609Whole white alabastrum(tetraploid) 340.692
CNS0095610Silvery flower (tetraploid) 156.202
CNS0095611Silvery flower (tetraploid) 255.415
CNS0095612Silvery flower (tetraploid) 336.893
CNS0095613Golden flower (tetraploid) 123.002
CNS0095614Golden flower (tetraploid) 237.066
CNS0095615Golden flower (tetraploid) 35.083
CRA001975CRR073297Stem 124.708
CRR073298Stem 221.679
CRR073299Stem 320.866
CRR073300Leaf 125.831
CRR073301Leaf 223.906
CRR073302Leaf 323.666
CRR073303Juvenile bud 127.304
CRR073304Juvenile bud 217.814
CRR073305Juvenile bud 321.048
CRR073306Third green 16.414
CRR073307Third green 25.125
CRR073308Third green 37.146
CRR073309Second white 113.251
CRR073310Second white 216.537
CRR073311Second white 38.803
CRR073312Silver flowering 15.922
CRR073313Silver flowering 25.582
CRR073314Silver flowering 35.753
CRR073315Gold flowering 165.993
CRR073316Gold flowering 287.085
CRR073317Gold flowering 338.715
CRR073318Tawny withering 112.525
CRR073319Tawny withering 220.019
CRR073320Tawny withering 310.665