Detail information of GWHGAAZE025683


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008242558.10PREDICTED: probable lactoylglutathione lyase, chloroplast [Prunus mume]
COGYP_004421008.16E-51glyoxalase I
Swissprottr|Q8W593|LGUC_ARATH0Probable lactoylglutathione lyase, chloroplast (Precursor)
trEMBLtr|A0A068U550|A0A068U550_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_9 {ECO:0000313|EMBL:CDP03289.1}
TAIR10AT1G67280.18E-149Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6589550265906402-
GWHAAZE00000007mRNA6589550265906402-
GWHAAZE00000007exon6589550265895680-
GWHAAZE00000007exon6589585765895954-
GWHAAZE00000007exon6589817965898319-
GWHAAZE00000007exon6589898965899096-
GWHAAZE00000007exon6590184065901887-
GWHAAZE00000007exon6590239765902558-
GWHAAZE00000007exon6590353865903602-
GWHAAZE00000007exon6590377765903901-
GWHAAZE00000007exon6590430865904509-
GWHAAZE00000007exon6590633665906402-
GWHAAZE00000007CDS6590633665906402-
GWHAAZE00000007CDS6590430865904509-
GWHAAZE00000007CDS6590377765903901-
GWHAAZE00000007CDS6590353865903602-
GWHAAZE00000007CDS6590239765902558-
GWHAAZE00000007CDS6590184065901887-
GWHAAZE00000007CDS6589898965899096-
GWHAAZE00000007CDS6589817965898319-
GWHAAZE00000007CDS6589591365895954-
GWHAAZE00000007three_prime_UTR6589585765895912-
GWHAAZE00000007three_prime_UTR6589550265895680-
Transcript Sequence

Network for GWHGAAZE025683

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00903.26Glyoxalase751959.50E-25
PF00903.26Glyoxalase2063059.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01759GLO1, gloA Metabolic pathways map01100
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0004462molecular_functionlactoylglutathione lyase activity
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.814
SRR3591706second leaf2.374
SRR3591707mature leaf4.836
SRR3591708Shoot apex5.097
SRR3591709Stem7.487
SRR3591710White floral bud3.380
SRR3591711White flower3.621
SRR3591712Green floral bud3.661
SRR3591713Yellow flower5.008
SRP173429 SRR8316895Juvenile bud stage 11.198
SRR8316896Juvenile bud stage 17.132
SRR8316897Juvenile bud stage 7.745
SRR8316894Third green stage 7.391
SRR8316900Third green stage 15.627
SRR8316901Third green stage 14.895
SRR8316898Complete white stage 5.969
SRR8316899Complete white stage 26.584
SRR8316903Complete white stage 12.563
SRR8316902Silver flowering stage8.460
SRR8316904Silver flowering stage10.937
SRR8316905Silver flowering stage4.785
SRR8316906Gold flowering stage 16.293
SRR8316907Gold flowering stage 13.600
SRR8316908Gold flowering stage 12.475
SRP132670SRR6706286Control5.905
SRR6706287Light intensity 50%7.879
SRR6706288Light intensity 20%8.681
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.242
CNS0095593Slightly white alabastrum(diploid) 215.934
CNS0095594Slightly white alabastrum(diploid) 313.846
CNS0095595Whole white alabastrum(diploid) 211.121
CNS0095596Whole white alabastrum(diploid) 311.206
CNS0095597Whole white alabastrum(diploid) 414.620
CNS0095598Silvery flower (diploied) 116.542
CNS0095599Silvery flower (diploied) 211.403
CNS0095600Silvery flower (diploied) 39.186
CNS0095601Golden flower (diploid) 112.095
CNS0095602Golden flower (diploid) 28.853
CNS0095603Golden flower (diploid) 39.252
CNS0095604Slightly white alabastrum(tetraploid) 114.734
CNS0095605Slightly white alabastrum(tetraploid) 212.836
CNS0095606Slightly white alabastrum(tetraploid) 315.786
CNS0095607Whole white alabastrum(tetraploid) 19.410
CNS0095608Whole white alabastrum(tetraploid) 28.067
CNS0095609Whole white alabastrum(tetraploid) 311.291
CNS0095610Silvery flower (tetraploid) 116.254
CNS0095611Silvery flower (tetraploid) 28.420
CNS0095612Silvery flower (tetraploid) 313.044
CNS0095613Golden flower (tetraploid) 19.655
CNS0095614Golden flower (tetraploid) 212.439
CNS0095615Golden flower (tetraploid) 36.659
CRA001975CRR073297Stem 110.433
CRR073298Stem 28.123
CRR073299Stem 32.073
CRR073300Leaf 110.071
CRR073301Leaf 28.341
CRR073302Leaf 32.459
CRR073303Juvenile bud 12.193
CRR073304Juvenile bud 21.647
CRR073305Juvenile bud 32.911
CRR073306Third green 10.696
CRR073307Third green 20.806
CRR073308Third green 30.248
CRR073309Second white 10.918
CRR073310Second white 20.755
CRR073311Second white 30.307
CRR073312Silver flowering 10.613
CRR073313Silver flowering 20.134
CRR073314Silver flowering 30.409
CRR073315Gold flowering 14.730
CRR073316Gold flowering 24.007
CRR073317Gold flowering 31.539
CRR073318Tawny withering 13.287
CRR073319Tawny withering 26.300
CRR073320Tawny withering 34.552