Detail information of GWHGAAZE025622


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006427040.19.7839E-112hypothetical protein CICLE_v10025757mg [Citrus clementina]
Swissprottr|Q9SYG2|ASIL1_ARATH5E-20Trihelix transcription factor ASIL1 {ECO:0000305}
trEMBLtr|V4SN17|V4SN17_9ROSI4E-112Uncharacterized protein {ECO:0000313|EMBL:ESR40280.1}
TAIR10AT3G24490.12E-64Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6475820564759053+
GWHAAZE00000007mRNA6475820564759053+
GWHAAZE00000007exon6475820564759053+
GWHAAZE00000007CDS6475820564759053+
Transcript Sequence

Network for GWHGAAZE025622

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4471343.30E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.581
SRR3591706second leaf23.081
SRR3591707mature leaf19.575
SRR3591708Shoot apex30.859
SRR3591709Stem26.053
SRR3591710White floral bud35.469
SRR3591711White flower43.415
SRR3591712Green floral bud29.252
SRR3591713Yellow flower36.646
SRP173429 SRR8316895Juvenile bud stage 12.957
SRR8316896Juvenile bud stage 15.619
SRR8316897Juvenile bud stage 7.920
SRR8316894Third green stage 9.080
SRR8316900Third green stage 21.916
SRR8316901Third green stage 24.274
SRR8316898Complete white stage 7.291
SRR8316899Complete white stage 28.748
SRR8316903Complete white stage 17.587
SRR8316902Silver flowering stage10.710
SRR8316904Silver flowering stage17.191
SRR8316905Silver flowering stage10.239
SRR8316906Gold flowering stage 26.602
SRR8316907Gold flowering stage 20.662
SRR8316908Gold flowering stage 27.822
SRP132670SRR6706286Control31.022
SRR6706287Light intensity 50%31.785
SRR6706288Light intensity 20%31.170
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.867
CNS0095593Slightly white alabastrum(diploid) 214.770
CNS0095594Slightly white alabastrum(diploid) 318.649
CNS0095595Whole white alabastrum(diploid) 216.643
CNS0095596Whole white alabastrum(diploid) 311.822
CNS0095597Whole white alabastrum(diploid) 413.258
CNS0095598Silvery flower (diploied) 123.230
CNS0095599Silvery flower (diploied) 216.802
CNS0095600Silvery flower (diploied) 314.216
CNS0095601Golden flower (diploid) 115.599
CNS0095602Golden flower (diploid) 213.855
CNS0095603Golden flower (diploid) 313.807
CNS0095604Slightly white alabastrum(tetraploid) 115.160
CNS0095605Slightly white alabastrum(tetraploid) 211.488
CNS0095606Slightly white alabastrum(tetraploid) 328.793
CNS0095607Whole white alabastrum(tetraploid) 113.263
CNS0095608Whole white alabastrum(tetraploid) 29.288
CNS0095609Whole white alabastrum(tetraploid) 317.843
CNS0095610Silvery flower (tetraploid) 121.428
CNS0095611Silvery flower (tetraploid) 216.683
CNS0095612Silvery flower (tetraploid) 318.115
CNS0095613Golden flower (tetraploid) 118.585
CNS0095614Golden flower (tetraploid) 222.019
CNS0095615Golden flower (tetraploid) 314.670
CRA001975CRR073297Stem 115.116
CRR073298Stem 216.223
CRR073299Stem 311.608
CRR073300Leaf 113.794
CRR073301Leaf 215.530
CRR073302Leaf 38.150
CRR073303Juvenile bud 111.963
CRR073304Juvenile bud 29.393
CRR073305Juvenile bud 38.469
CRR073306Third green 17.029
CRR073307Third green 24.300
CRR073308Third green 36.362
CRR073309Second white 15.340
CRR073310Second white 24.973
CRR073311Second white 36.726
CRR073312Silver flowering 15.784
CRR073313Silver flowering 24.859
CRR073314Silver flowering 37.447
CRR073315Gold flowering 16.452
CRR073316Gold flowering 29.921
CRR073317Gold flowering 35.573
CRR073318Tawny withering 116.567
CRR073319Tawny withering 211.318
CRR073320Tawny withering 312.770