Detail information of GWHGAAZE025612


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009336862.10PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1 [Pyrus x bretschneideri]
COGYP_003953927.15E-73enoyl-CoA hydratase/isomerase family protein
Swissprottr|Q9T0K7|HIBC6_ARATH03-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial (Precursor)
trEMBLtr|A0A067ESE6|A0A067ESE6_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO54127.1}
TAIR10AT4G13360.17E-174ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6444439464454691-
GWHAAZE00000007mRNA6444439464454691-
GWHAAZE00000007exon6444439464444519-
GWHAAZE00000007exon6444571464445815-
GWHAAZE00000007exon6444653664446663-
GWHAAZE00000007exon6444721364447391-
GWHAAZE00000007exon6444829364448422-
GWHAAZE00000007exon6444986664449962-
GWHAAZE00000007exon6445005864450192-
GWHAAZE00000007exon6445248864452552-
GWHAAZE00000007exon6445275264452853-
GWHAAZE00000007exon6445443664454691-
GWHAAZE00000007CDS6445443664454691-
GWHAAZE00000007CDS6445275264452853-
GWHAAZE00000007CDS6445248864452552-
GWHAAZE00000007CDS6445005864450192-
GWHAAZE00000007CDS6444986664449962-
GWHAAZE00000007CDS6444829364448422-
GWHAAZE00000007CDS6444721364447391-
GWHAAZE00000007CDS6444653664446663-
GWHAAZE00000007CDS6444571464445815-
GWHAAZE00000007CDS6444441864444519-
GWHAAZE00000007three_prime_UTR6444439464444417-
Transcript Sequence

Network for GWHGAAZE025612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16113.6ECH_2704195.30E-105
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05605HIBCH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0003860molecular_function3-hydroxyisobutyryl-CoA hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.615
SRR3591706second leaf18.507
SRR3591707mature leaf21.289
SRR3591708Shoot apex27.667
SRR3591709Stem37.063
SRR3591710White floral bud24.268
SRR3591711White flower26.522
SRR3591712Green floral bud43.196
SRR3591713Yellow flower22.127
SRP173429 SRR8316895Juvenile bud stage 31.458
SRR8316896Juvenile bud stage 54.551
SRR8316897Juvenile bud stage 23.019
SRR8316894Third green stage 23.031
SRR8316900Third green stage 75.154
SRR8316901Third green stage 72.557
SRR8316898Complete white stage 26.065
SRR8316899Complete white stage 68.615
SRR8316903Complete white stage 36.928
SRR8316902Silver flowering stage17.715
SRR8316904Silver flowering stage21.835
SRR8316905Silver flowering stage9.744
SRR8316906Gold flowering stage 34.225
SRR8316907Gold flowering stage 39.009
SRR8316908Gold flowering stage 29.293
SRP132670SRR6706286Control53.629
SRR6706287Light intensity 50%51.318
SRR6706288Light intensity 20%59.010
CNP0000432CNS0095592Slightly white alabastrum(diploid) 152.174
CNS0095593Slightly white alabastrum(diploid) 255.695
CNS0095594Slightly white alabastrum(diploid) 355.439
CNS0095595Whole white alabastrum(diploid) 246.907
CNS0095596Whole white alabastrum(diploid) 353.639
CNS0095597Whole white alabastrum(diploid) 447.465
CNS0095598Silvery flower (diploied) 134.822
CNS0095599Silvery flower (diploied) 246.403
CNS0095600Silvery flower (diploied) 349.325
CNS0095601Golden flower (diploid) 129.991
CNS0095602Golden flower (diploid) 251.686
CNS0095603Golden flower (diploid) 344.881
CNS0095604Slightly white alabastrum(tetraploid) 157.925
CNS0095605Slightly white alabastrum(tetraploid) 252.112
CNS0095606Slightly white alabastrum(tetraploid) 352.309
CNS0095607Whole white alabastrum(tetraploid) 147.840
CNS0095608Whole white alabastrum(tetraploid) 243.183
CNS0095609Whole white alabastrum(tetraploid) 355.228
CNS0095610Silvery flower (tetraploid) 146.772
CNS0095611Silvery flower (tetraploid) 250.408
CNS0095612Silvery flower (tetraploid) 344.594
CNS0095613Golden flower (tetraploid) 125.593
CNS0095614Golden flower (tetraploid) 235.550
CNS0095615Golden flower (tetraploid) 316.434
CRA001975CRR073297Stem 149.287
CRR073298Stem 247.443
CRR073299Stem 365.098
CRR073300Leaf 160.741
CRR073301Leaf 258.869
CRR073302Leaf 372.078
CRR073303Juvenile bud 175.848
CRR073304Juvenile bud 254.867
CRR073305Juvenile bud 369.168
CRR073306Third green 124.479
CRR073307Third green 220.511
CRR073308Third green 323.978
CRR073309Second white 138.714
CRR073310Second white 221.438
CRR073311Second white 318.816
CRR073312Silver flowering 116.568
CRR073313Silver flowering 221.268
CRR073314Silver flowering 317.004
CRR073315Gold flowering 156.464
CRR073316Gold flowering 259.641
CRR073317Gold flowering 349.490
CRR073318Tawny withering 155.856
CRR073319Tawny withering 257.920
CRR073320Tawny withering 356.900