Detail information of GWHGAAZE024606


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEK80405.10HQT [Lonicera japonica]
Swissprottr|Q8GSM7|HST_TOBAC0Shikimate O-hydroxycinnamoyltransferase
trEMBLtr|G0ZDQ5|G0ZDQ5_LONJA0HQT {ECO:0000313|EMBL:AEK80405.1}
TAIR10AT5G48930.15E-137hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4602278646028418-
GWHAAZE00000007mRNA4602278646028418-
GWHAAZE00000007exon4602278646023673-
GWHAAZE00000007exon4602744846027576-
GWHAAZE00000007exon4602767246028096-
GWHAAZE00000007exon4602836346028418-
GWHAAZE00000007five_prime_UTR4602836346028418-
GWHAAZE00000007five_prime_UTR4602808046028096-
GWHAAZE00000007CDS4602767246028079-
GWHAAZE00000007CDS4602744846027576-
GWHAAZE00000007CDS4602278646023673-
Transcript Sequence

Network for GWHGAAZE024606

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02458.16Transferase11376.40E-35
PF02458.16Transferase1664713.80E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13065E2.3.1.133, HCT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0016747molecular_functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.314
SRR3591706second leaf94.657
SRR3591707mature leaf65.174
SRR3591708Shoot apex100.635
SRR3591709Stem11.065
SRR3591710White floral bud20.416
SRR3591711White flower16.371
SRR3591712Green floral bud34.060
SRR3591713Yellow flower11.044
SRP173429 SRR8316895Juvenile bud stage 25.258
SRR8316896Juvenile bud stage 24.701
SRR8316897Juvenile bud stage 14.355
SRR8316894Third green stage 12.191
SRR8316900Third green stage 25.690
SRR8316901Third green stage 28.392
SRR8316898Complete white stage 5.609
SRR8316899Complete white stage 28.720
SRR8316903Complete white stage 10.938
SRR8316902Silver flowering stage3.284
SRR8316904Silver flowering stage3.938
SRR8316905Silver flowering stage2.386
SRR8316906Gold flowering stage 9.620
SRR8316907Gold flowering stage 9.842
SRR8316908Gold flowering stage 13.921
SRP132670SRR6706286Control23.532
SRR6706287Light intensity 50%25.039
SRR6706288Light intensity 20%23.471
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.493
CNS0095593Slightly white alabastrum(diploid) 224.903
CNS0095594Slightly white alabastrum(diploid) 321.290
CNS0095595Whole white alabastrum(diploid) 221.185
CNS0095596Whole white alabastrum(diploid) 313.240
CNS0095597Whole white alabastrum(diploid) 414.427
CNS0095598Silvery flower (diploied) 138.922
CNS0095599Silvery flower (diploied) 237.203
CNS0095600Silvery flower (diploied) 317.196
CNS0095601Golden flower (diploid) 129.605
CNS0095602Golden flower (diploid) 222.665
CNS0095603Golden flower (diploid) 322.504
CNS0095604Slightly white alabastrum(tetraploid) 139.679
CNS0095605Slightly white alabastrum(tetraploid) 237.025
CNS0095606Slightly white alabastrum(tetraploid) 368.770
CNS0095607Whole white alabastrum(tetraploid) 126.572
CNS0095608Whole white alabastrum(tetraploid) 26.649
CNS0095609Whole white alabastrum(tetraploid) 334.247
CNS0095610Silvery flower (tetraploid) 17.958
CNS0095611Silvery flower (tetraploid) 224.368
CNS0095612Silvery flower (tetraploid) 331.277
CNS0095613Golden flower (tetraploid) 15.027
CNS0095614Golden flower (tetraploid) 25.963
CNS0095615Golden flower (tetraploid) 35.160
CRA001975CRR073297Stem 146.224
CRR073298Stem 245.286
CRR073299Stem 377.215
CRR073300Leaf 134.445
CRR073301Leaf 234.252
CRR073302Leaf 333.585
CRR073303Juvenile bud 124.404
CRR073304Juvenile bud 239.070
CRR073305Juvenile bud 326.659
CRR073306Third green 117.247
CRR073307Third green 210.577
CRR073308Third green 313.682
CRR073309Second white 119.908
CRR073310Second white 217.803
CRR073311Second white 314.139
CRR073312Silver flowering 114.923
CRR073313Silver flowering 218.408
CRR073314Silver flowering 313.397
CRR073315Gold flowering 119.782
CRR073316Gold flowering 226.663
CRR073317Gold flowering 332.503
CRR073318Tawny withering 18.736
CRR073319Tawny withering 27.386
CRR073320Tawny withering 313.291