Gene detail

Detail information of GWHGAAZE024390

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010655213.1	PREDICTED: histone acetyltransferase HAC1-like [Vitis vinifera]
Swissprot	tr\|Q9C5X9\|HAC1_ARATH	Histone acetyltransferase HAC1
trEMBL	tr\|F6GYH3\|F6GYH3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45009.1}
TAIR10	AT1G79000.1	histone acetyltransferase of the CBP family 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	41401606	41424067	+
GWHAAZE00000007	mRNA	41401606	41424067	+
GWHAAZE00000007	exon	41401606	41401704	+
GWHAAZE00000007	exon	41407417	41407509	+
GWHAAZE00000007	exon	41409074	41409380	+
GWHAAZE00000007	exon	41409467	41409964	+
GWHAAZE00000007	exon	41410121	41411907	+
GWHAAZE00000007	exon	41412768	41413064	+
GWHAAZE00000007	exon	41413157	41413435	+
GWHAAZE00000007	exon	41414837	41414965	+
GWHAAZE00000007	exon	41415121	41415321	+
GWHAAZE00000007	exon	41415440	41415582	+
GWHAAZE00000007	exon	41415679	41415991	+
GWHAAZE00000007	exon	41417749	41417888	+
GWHAAZE00000007	exon	41422563	41422641	+
GWHAAZE00000007	exon	41422779	41423171	+
GWHAAZE00000007	exon	41423629	41423846	+
GWHAAZE00000007	exon	41423950	41424067	+
GWHAAZE00000007	CDS	41401606	41401704	+
GWHAAZE00000007	CDS	41407417	41407509	+
GWHAAZE00000007	CDS	41409074	41409380	+
GWHAAZE00000007	CDS	41409467	41409964	+
GWHAAZE00000007	CDS	41410121	41411907	+
GWHAAZE00000007	CDS	41412768	41413064	+
GWHAAZE00000007	CDS	41413157	41413435	+
GWHAAZE00000007	CDS	41414837	41414965	+
GWHAAZE00000007	CDS	41415121	41415321	+
GWHAAZE00000007	CDS	41415440	41415582	+
GWHAAZE00000007	CDS	41415679	41415991	+
GWHAAZE00000007	CDS	41417749	41417888	+
GWHAAZE00000007	CDS	41422563	41422641	+
GWHAAZE00000007	CDS	41422779	41423171	+
GWHAAZE00000007	CDS	41423629	41423846	+
GWHAAZE00000007	CDS	41423950	41424067	+

Transcript Sequence
>GWHTAAZE024424 ATGGGTGCTTATCAAGCTCCAAAAATCCTTTCCCTAACCATATCTCAAGCCTATGTTTCTTTCTTTGTGTCATGTGCTCGGAAATGGGGGAAGACAGAGCGGCAGCACCAACCTCAAACTATACCACCCAAGAAGGTGATGGATATAGTAAGACGCTTAGAGGAGGGTCTTTTCAAATCTGCTAACACAAAGGAGGAGTACTTGAATCTGGAGACATTGGAGAATCGTTTACAGGTTTTAATTAGACGGATACCTTTCAGTAGTCACAACCAACAACTTCAGCAACATGTCAATTCTTCCTCTACCATTGGCACGATGATCCCGACTCCTGGTATGCCTCAAAGCGGGAATTCAAACTTGATGTCTACATCGTCTGTGGATAACTCCATGATTCCTTCCAGTGGTTATAATAGCATAGCATCCTCGACCATCAACACAGGAAGCTTCTTGCCAACTGCCACTGGTGCCATACACAGTGGTTCCTTCAATTCATCTAATGGACCTTTTACCGATGGATATCAACAGTCACCATCCAATTTTTCGATCAGTTCTGGTGCTAATAGCATGGTGTCATCAACCGGTGTACAAAGAATGACAAGCCAAATGATACCTACACCTGGATTCAACAACATCAACAACAACAATAGTCAATCTTACTTGAATTTGGATTCTTCTAGTAATGGTGTTGGGTTCTCTGGTGTTGAATCTATGGTATCACAGCCGCTGCAACAAAAGCAGCATGTTGGTGGTCAAAATAGCCGTATGTTGCATAGCCTTGGCAGTCATGTGGGTGGCGGAATTAGGTCTGGTTTGCAGCAGAAATCTTATGCGTTTTCAAATGGGACCTTAAATGGTGGTTTAGGGATGATGGGGACCAACTCACCAGTGATGAATGGTCCAGGAACCTCTGAGGGCTATCTAACTGCTCCACTGTATGGAAACTCGTCCGCACCATTACAACAGCATTTTGATCAGCATCAGCGACAGATGTTGCAGGGTGATGGATATGGAAGTAGTACAGCTGATTCCTCTGGGTCTGGTAGCTTCCATTCTCCTTTGACATCTGGTGGATTGATGATGAATAATCAGGACATTAATTCAGTAAGTTTGCAGTCCCTACCCAAAACGAACTTTCCTTTGTTGACCAATCAATCAAATTTGCACACTATTCAACAGGCTGCAAATGTGAAGGCTTCAATTGATCAATCGGAAAAGATGAACTTTCAATCTCCTCATTCACTGCGAGAGAATCTTGTACAGTCTCATCTGCAGCAACAATTTGAACAGCAGCCTAATCATTTTCAACCACAACTTGTTCAACAACAGCGCTTACAAAAGCAGCCAAGTCAGCAGCGACAGCTTTCATTAAAGAATGATGCATTCGGTCAGTCTCTGGTGCAGTCTGACCTAGTCAGTCAAATAAAGTTGGAGCCAGGAATGGAGCACCATGATGAGGCTCTGCGCCCACAAGTCTCTGAACAGTTCAATTCTTCAGAGATACTCGCTCTTCAGCCTGGCCCACAGGATATTTGTTCATCACTTGCTCAAACTTCACAGCAGATGGAACAGTTGTTGCATCATCACCAGTTTGTTGCTGATTCTCAAAATGACTTTAACCATCCTATTGGAGTTCAGTCAGAAGCTGCGCATCTGGGTCAATGGCATCCTAGATCTCAAGACGGGTCTCACATGCCAGGAGTTATGTCACATGAGCAAGATGTTCAAGAGGAATTTCGTCACAGATTAACTGGCCAAGATGAGGCTCAGCGAAATAATTTTTCCTCAGAAGGGTCTATCATTTCTCAAGCTGTGACTACTAGAATAGCAGCATCTCCAAATTATACTGGTACTATGTGTACATCTGGTACTCTGAACCGTGAGCTGGATTTCAGGAACCAGCAGAGGTGGCTATTGTTCTTGAGGCATGCTCGTAGTTGTAAATATCCGGAAGGAAAATGTCCAATAAACTGTTGCATAGATGCTCAAAAACTTTGGAGGCATGTGGAAAGATGCAATGTAGCTCAATGTCCACATCTTCGTTGTGATTCTACCAAGGCTTTACTGAAGCATCAGAGGGAATGTAGGAATCCTAGCTGCCCGGTTTGCATTCCAGTGAGGAACTTCATTAAGATGCAGTCTAAGACAATCACTCTTCCAGAGTCTAATTCTGCTCTTCCGTGTTCTGTTAATAGATCATGCAAGTCTCATGATTCTGGAGATGCTTCAGGTAGATTGGCTTCAAAGATGAGTCCCTTAGTTATTGAAATGTCTGAAGATTTACACCCGTCTATGAAGCGCATGAAAATTGAGCCGCATTCCCAATCTATTCCCCCACAAAGTGAAAGTTCTGCTATGCCAGTTCCTGCCATTAGTGAATCTCATGTTCTTCAGGATGTACAGCTGGAGGAACATCAACATGGTGGCATATGCATGCCAATGAAGTCTGAAGTTACAGTAGTAAAGATGGAAATTCCTTTAAGTTCTGCACAAGCAAGTCCAATGGGCATTATTACGAAGAAAGATACTATGGATGATACCTATATCCAAAGGTCCGACTCTGATGTTATTATATCGAATGCTCCTGCTGGTTTTCCGAAGGAGGAAAGGCTTAAGATTGAGAAGGAAGTAGACCAGGGTAAACAGGAAAATGTGTCACTGACTTCTGAAAATACTAGTGGAACTAAGTCTGGAAAGCCAAAAATAAAGGGAGTGTCTTTGATGGAATTGTTTACTCCTGAACAAGTCCGGGAGCATATCACAGGTCTCAGACGGTGGGTTGGCCAGAGTAAAGCTAAGGCAGAAAAGAATCAAGCTATGGAACACTCGATGAGTGAGAATTCATGCCAGTTGTGTGCGGTCGAGAAACTCACTTTTGAACCACCACCAATATATTGCACACCATGCGGTGCTCGCATTAAAAGAAATGCAATGTATTACACTATAGGAACTGGTGATACAAGGCACTTCTTCTGCATTCCGTGCTATAATGAAGCCCGTGGAGACACTATCCTAGTTGATACAACTGCTATACCTAAGGCAAGGCTGGAGAAGAAGAAAAATGACGAGGAGACTGAAGAATGGTGGGTTCAATGTGACAAATGTGAAGCTTGGCAACATCAAATCTGTGCATTGTTTAATGGTCGAAGGAATGATGGTGGGCAAGCTGAGTACACTTGTCCAAACTGCTATATAGAAGAAGTTGAGAGAGGAGAGCGTACGCCATTACCTCAGAGTGCAGTTCTTGGAGCAAAAGATTTGCCTAGAACAATTCTGAGTGATCACATAGAGCAACGATTATTTAGGCGACTTAAACAGGAACGAACAGAGAGGGCAAGGGTCAGTGGGAAAAGCTATGATGAGGTTCCGGGTGCAGAATCTCTGGTTATTAGGGTTGTGTCATCAGTAGACAAAAAGTTGGAAGTGAAGCAAAGGTTTCTTGAGATTTTCCAAGAAGAGAATTATCCGACTGAATTCGCATATAAATCTAAGGTAGTGTTGCTTTTTCAGAAAATTGAAGGTGTAGAAGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGTTCAGAATGTCAACAGCCAAATCATCGACGTGTTTATCTATCATATTTGGATTCTGTTAAGTATTTCAGGCCAGAGATTAGAGCAGTGACAGGAGAGGCTCTCCGCACATTTGTTTATCATGAAATTCTGATTGGATACCTTGAATATTGCAAAAAACGTGGTTTCACAAGTTGCTACATATGGGCTTGTCCACCGCTAAAGGGTGAAGATTATATTTTATATTGCCATCCTGAAATTCAGAAAACACCGAAATCTGATAAACTCCGAGAATGGTATTTATCGATGTTGAGAAAAGCTATGAAGGAAAATATTGTAGCCGAGCTAACTAATTTATATGATCATTTCTTTGTAACATCGGGTGAATGTAAGGCCAAGGTTACTGCAGCTCGACTACCATATTTTGATGGAGACTATTGGCCTGGTGCTGCTGAGGATATTATCTATCAGATTCGCCAAGAAGAAGATGGGAGGAAATTGCATAAGAAAGGGACAACAAAAAAAATTATAACAAAAAGAGCTCTAAAAGCATCTGGTCAATCTGATCTTTCCGGCAATGCATCGAAGGATGTGCTACTAATGCATAAACTTGGCGAATCGATTAGCCCAATGAAGGAAGATTTCATCATGGTTCACTTGCAGCATTCTTGCACTCATTGCTGTATCCTAATGGTATCTGGAAATCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGCTTTGCGATAAGTGTTATGAAGCTGAACAACAGCTCGAAGAGAGAGAGAGACATCCTATCAACCACAGAGACAAGCATGCACTTCATCCGGTTGAAATCAACAATGTAGCTGGAGATACCAAAGATAAAGATGAGATTCTTGAGAGTGAGTTCTTTGATACTAGACAGGCATTTCTGAGCCTTTGCCAAGGGAACCATTACCAATACGATACCCTACGACGTGCAAAACATTCCTCAATGATGGTCCTTTACCATCTTCACAACCCCACTGCTCCTGCATTTGTGACGACATGCAATATATGCCATCTTGATATAGAATCTGGTCAAGGTTGGCGCTGTGAGATATGCCCAGATTATGATGTATGCAATGCCTGTTTCCAAAAGGATGGAGGAATTGATCATCCCCACAAGTTGACTAATCATCCCTCCCTGGCCGAACGTGATGCACAAAATAAAGAAGCTAGGCAATTGCGAGTTGTGCAGCTTAGGAAGATGCTCGATCTTCTGGTGCATGCATCTCAGTGCCGTTCTCCACAGTGCCTATATCCAAACTGTAGGAAGGTGAAGGGGCTTTTCCGCCATGGGATACAATGCAAAACACGTGCTTCTGGTGGCTGTGTTCTCTGTAAGAAAATGTGGTATCTTCTTCAACTCCATTCTCGAGCCTGCAAAGAATCCGAATGCCATGTACCTCGTTGCAGAGATTTGAGGGAACATTTGAGGAGGTTGCAACAGCAGTCTGATAGCAGGCGCAGGGCTGCTGTAATGGAGATGATGAGGCAGCGAGCCGCTGAGGTTGCTAGCGGTGGTGCTGTGTGA

Network for GWHGAAZE024390

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02135.17	zf-TAZ	634	702	6.10E-13
PF00628.30	PHD	1021	1063	4.30E-07
PF08214.12	HAT_KAT11	1120	1336	4.10E-31
PF00569.18	ZZ	1520	1559	2.10E-07
PF02135.17	zf-TAZ	1588	1658	6.80E-13

Protein Sequence

>GWHPAAZE024408
MGAYQAPKILSLTISQAYVSFFVSCARKWGKTERQHQPQTIPPKKVMDIVRRLEEGLFKSANTKEEYLNLETLENRLQVLIRRIPFSSHNQQLQQHVNSSSTIGTMIPTPGMPQSGNSNLMSTSSVDNSMIPSSGYNSIASSTINTGSFLPTATGAIHSGSFNSSNGPFTDGYQQSPSNFSISSGANSMVSSTGVQRMTSQMIPTPGFNNINNNNSQSYLNLDSSSNGVGFSGVESMVSQPLQQKQHVGGQNSRMLHSLGSHVGGGIRSGLQQKSYAFSNGTLNGGLGMMGTNSPVMNGPGTSEGYLTAPLYGNSSAPLQQHFDQHQRQMLQGDGYGSSTADSSGSGSFHSPLTSGGLMMNNQDINSVSLQSLPKTNFPLLTNQSNLHTIQQAANVKASIDQSEKMNFQSPHSLRENLVQSHLQQQFEQQPNHFQPQLVQQQRLQKQPSQQRQLSLKNDAFGQSLVQSDLVSQIKLEPGMEHHDEALRPQVSEQFNSSEILALQPGPQDICSSLAQTSQQMEQLLHHHQFVADSQNDFNHPIGVQSEAAHLGQWHPRSQDGSHMPGVMSHEQDVQEEFRHRLTGQDEAQRNNFSSEGSIISQAVTTRIAASPNYTGTMCTSGTLNRELDFRNQQRWLLFLRHARSCKYPEGKCPINCCIDAQKLWRHVERCNVAQCPHLRCDSTKALLKHQRECRNPSCPVCIPVRNFIKMQSKTITLPESNSALPCSVNRSCKSHDSGDASGRLASKMSPLVIEMSEDLHPSMKRMKIEPHSQSIPPQSESSAMPVPAISESHVLQDVQLEEHQHGGICMPMKSEVTVVKMEIPLSSAQASPMGIITKKDTMDDTYIQRSDSDVIISNAPAGFPKEERLKIEKEVDQGKQENVSLTSENTSGTKSGKPKIKGVSLMELFTPEQVREHITGLRRWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTPCGARIKRNAMYYTIGTGDTRHFFCIPCYNEARGDTILVDTTAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERTPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERTERARVSGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFAYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQQPNHRRVYLSYLDSVKYFRPEIRAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAMKENIVAELTNLYDHFFVTSGECKAKVTAARLPYFDGDYWPGAAEDIIYQIRQEEDGRKLHKKGTTKKIITKRALKASGQSDLSGNASKDVLLMHKLGESISPMKEDFIMVHLQHSCTHCCILMVSGNRWVCNQCKNFQLCDKCYEAEQQLEERERHPINHRDKHALHPVEINNVAGDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIESGQGWRCEICPDYDVCNACFQKDGGIDHPHKLTNHPSLAERDAQNKEARQLRVVQLRKMLDLLVHASQCRSPQCLYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHSRACKESECHVPRCRDLREHLRRLQQQSDSRRRAAVMEMMRQRAAEVASGGAV

Gene family

Gene family	subfamily
Transcription Factors Family	TAZ

KEGG pathway

KO	Enzyme	pathway	mapID
K04498	EP300, CREBBP, KAT3	Wnt signaling pathway	map04310
		Notch signaling pathway	map04330
		TGF-beta signaling pathway	map04350
		JAK-STAT signaling pathway	map04630
		HIF-1 signaling pathway	map04066
		FoxO signaling pathway	map04068
		cAMP signaling pathway	map04024
		Cell cycle	map04110
		Adherens junction	map04520
		Glucagon signaling pathway	map04922
		Growth hormone synthesis, secretion and action	map04935
		Thyroid hormone signaling pathway	map04919
		Melanogenesis	map04916
		Long-term potentiation	map04720

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0016573	biological_process	histone acetylation
GO:0005634	cellular_component	nucleus
GO:0004402	molecular_function	histone acetyltransferase activity
GO:0003712	molecular_function	transcription coregulator activity
GO:0008270	molecular_function	zinc ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	20.748
	SRR3591706	second leaf	15.529
	SRR3591707	mature leaf	20.176
	SRR3591708	Shoot apex	20.438
	SRR3591709	Stem	21.649
	SRR3591710	White floral bud	27.584
	SRR3591711	White flower	29.768
	SRR3591712	Green floral bud	22.301
	SRR3591713	Yellow flower	36.345
SRP173429	SRR8316895	Juvenile bud stage	10.941
	SRR8316896	Juvenile bud stage	14.690
	SRR8316897	Juvenile bud stage	7.676
	SRR8316894	Third green stage	7.609
	SRR8316900	Third green stage	17.022
	SRR8316901	Third green stage	15.330
	SRR8316898	Complete white stage	4.931
	SRR8316899	Complete white stage	16.770
	SRR8316903	Complete white stage	15.439
	SRR8316902	Silver flowering stage	13.669
	SRR8316904	Silver flowering stage	25.009
	SRR8316905	Silver flowering stage	11.873
	SRR8316906	Gold flowering stage	37.879
	SRR8316907	Gold flowering stage	37.594
	SRR8316908	Gold flowering stage	32.155
SRP132670	SRR6706286	Control	12.371
	SRR6706287	Light intensity 50%	14.146
	SRR6706288	Light intensity 20%	15.148
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.579
	CNS0095593	Slightly white alabastrum(diploid) 2	6.917
	CNS0095594	Slightly white alabastrum(diploid) 3	7.354
	CNS0095595	Whole white alabastrum(diploid) 2	7.526
	CNS0095596	Whole white alabastrum(diploid) 3	6.424
	CNS0095597	Whole white alabastrum(diploid) 4	7.672
	CNS0095598	Silvery flower (diploied) 1	14.166
	CNS0095599	Silvery flower (diploied) 2	9.840
	CNS0095600	Silvery flower (diploied) 3	26.594
	CNS0095601	Golden flower (diploid) 1	12.456
	CNS0095602	Golden flower (diploid) 2	28.119
	CNS0095603	Golden flower (diploid) 3	27.521
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.082
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.094
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.109
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.512
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.161
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.355
	CNS0095610	Silvery flower (tetraploid) 1	23.863
	CNS0095611	Silvery flower (tetraploid) 2	24.758
	CNS0095612	Silvery flower (tetraploid) 3	23.269
	CNS0095613	Golden flower (tetraploid) 1	12.777
	CNS0095614	Golden flower (tetraploid) 2	19.727
	CNS0095615	Golden flower (tetraploid) 3	27.822
CRA001975	CRR073297	Stem 1	20.170
	CRR073298	Stem 2	17.157
	CRR073299	Stem 3	12.659
	CRR073300	Leaf 1	16.396
	CRR073301	Leaf 2	13.505
	CRR073302	Leaf 3	10.336
	CRR073303	Juvenile bud 1	9.965
	CRR073304	Juvenile bud 2	7.378
	CRR073305	Juvenile bud 3	17.859
	CRR073306	Third green 1	6.690
	CRR073307	Third green 2	3.654
	CRR073308	Third green 3	7.497
	CRR073309	Second white 1	6.391
	CRR073310	Second white 2	10.752
	CRR073311	Second white 3	14.689
	CRR073312	Silver flowering 1	12.630
	CRR073313	Silver flowering 2	9.329
	CRR073314	Silver flowering 3	10.788
	CRR073315	Gold flowering 1	6.653
	CRR073316	Gold flowering 2	10.839
	CRR073317	Gold flowering 3	6.451
	CRR073318	Tawny withering 1	10.581
	CRR073319	Tawny withering 2	9.044
	CRR073320	Tawny withering 3	8.587