Detail information of GWHGAAZE024291


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010257275.10PREDICTED: ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [Nelumbo nucifera]
COGYP_461669.12E-103diphosphate--fructose-6-phosphate 1-phosphotransferase
Swissprottr|Q8VYN6|PFKA5_ARATH0ATP-dependent 6-phosphofructokinase 5, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03186} (Precursor)
trEMBLtr|D7SXA1|D7SXA1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI22198.3}
TAIR10AT2G22480.10phosphofructokinase 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3953232739537467-
GWHAAZE00000007mRNA3953232739537467-
GWHAAZE00000007exon3953232739532494-
GWHAAZE00000007exon3953297239533082-
GWHAAZE00000007exon3953324439533324-
GWHAAZE00000007exon3953375539533859-
GWHAAZE00000007exon3953396139534075-
GWHAAZE00000007exon3953443039534518-
GWHAAZE00000007exon3953471039534850-
GWHAAZE00000007exon3953497739535051-
GWHAAZE00000007exon3953512339535224-
GWHAAZE00000007exon3953534339535438-
GWHAAZE00000007exon3953557039535681-
GWHAAZE00000007exon3953585739535930-
GWHAAZE00000007exon3953711639537200-
GWHAAZE00000007exon3953728939537467-
GWHAAZE00000007CDS3953728939537467-
GWHAAZE00000007CDS3953711639537200-
GWHAAZE00000007CDS3953585739535930-
GWHAAZE00000007CDS3953557039535681-
GWHAAZE00000007CDS3953534339535438-
GWHAAZE00000007CDS3953512339535224-
GWHAAZE00000007CDS3953497739535051-
GWHAAZE00000007CDS3953471039534850-
GWHAAZE00000007CDS3953443039534518-
GWHAAZE00000007CDS3953396139534075-
GWHAAZE00000007CDS3953375539533859-
GWHAAZE00000007CDS3953324439533324-
GWHAAZE00000007CDS3953297239533082-
GWHAAZE00000007CDS3953232739532494-
Transcript Sequence

Network for GWHGAAZE024291

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.21PFK1322856.50E-37
PF00365.21PFK3244572.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00850pfkA, PFK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
HIF-1 signaling pathwaymap04066
AMPK signaling pathwaymap04152
Glucagon signaling pathwaymap04922
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0006002biological_processfructose 6-phosphate metabolic process
GO:0003872molecular_function6-phosphofructokinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.446
SRR3591706second leaf0.558
SRR3591707mature leaf0.918
SRR3591708Shoot apex0.430
SRR3591709Stem0.209
SRR3591710White floral bud0.232
SRR3591711White flower0.604
SRR3591712Green floral bud1.124
SRR3591713Yellow flower0.820
SRP173429 SRR8316895Juvenile bud stage 0.542
SRR8316896Juvenile bud stage 0.493
SRR8316897Juvenile bud stage 0.171
SRR8316894Third green stage 0.280
SRR8316900Third green stage 0.963
SRR8316901Third green stage 0.913
SRR8316898Complete white stage 0.384
SRR8316899Complete white stage 0.936
SRR8316903Complete white stage 0.445
SRR8316902Silver flowering stage0.534
SRR8316904Silver flowering stage0.369
SRR8316905Silver flowering stage0.252
SRR8316906Gold flowering stage 3.305
SRR8316907Gold flowering stage 1.114
SRR8316908Gold flowering stage 5.702
SRP132670SRR6706286Control0.659
SRR6706287Light intensity 50%0.436
SRR6706288Light intensity 20%0.793
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.621
CNS0095593Slightly white alabastrum(diploid) 20.300
CNS0095594Slightly white alabastrum(diploid) 30.486
CNS0095595Whole white alabastrum(diploid) 20.478
CNS0095596Whole white alabastrum(diploid) 30.195
CNS0095597Whole white alabastrum(diploid) 40.205
CNS0095598Silvery flower (diploied) 10.286
CNS0095599Silvery flower (diploied) 20.727
CNS0095600Silvery flower (diploied) 30.138
CNS0095601Golden flower (diploid) 10.407
CNS0095602Golden flower (diploid) 20.697
CNS0095603Golden flower (diploid) 31.373
CNS0095604Slightly white alabastrum(tetraploid) 10.294
CNS0095605Slightly white alabastrum(tetraploid) 20.462
CNS0095606Slightly white alabastrum(tetraploid) 30.402
CNS0095607Whole white alabastrum(tetraploid) 10.420
CNS0095608Whole white alabastrum(tetraploid) 20.302
CNS0095609Whole white alabastrum(tetraploid) 30.227
CNS0095610Silvery flower (tetraploid) 10.863
CNS0095611Silvery flower (tetraploid) 20.282
CNS0095612Silvery flower (tetraploid) 30.473
CNS0095613Golden flower (tetraploid) 11.535
CNS0095614Golden flower (tetraploid) 21.008
CNS0095615Golden flower (tetraploid) 31.545
CRA001975CRR073297Stem 10.273
CRR073298Stem 20.340
CRR073299Stem 30.063
CRR073300Leaf 10.346
CRR073301Leaf 20.827
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.228
CRR073304Juvenile bud 20.037
CRR073305Juvenile bud 30.319
CRR073306Third green 10.003
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.022
CRR073310Second white 20.252
CRR073311Second white 30.070
CRR073312Silver flowering 11.463
CRR073313Silver flowering 21.103
CRR073314Silver flowering 30.992
CRR073315Gold flowering 10.124
CRR073316Gold flowering 20.694
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.031
CRR073319Tawny withering 20.029
CRR073320Tawny withering 30.027