Detail information of GWHGAAZE024122


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009775388.10PREDICTED: glucose-6-phosphate isomerase, cytosolic isoform X1 [Nicotiana sylvestris]
COGYP_001278641.16E-153glucose-6-phosphate isomerase
Swissprottr|P54243|G6PI_OENME0Glucose-6-phosphate isomerase, cytosolic
trEMBLtr|A0A076FN11|A0A076FN11_TOBAC0Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612}
TAIR10AT5G42740.10Sugar isomerase (SIS) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3519767635205349-
GWHAAZE00000007mRNA3519767635205349-
GWHAAZE00000007exon3519767635198023-
GWHAAZE00000007exon3519832535198432-
GWHAAZE00000007exon3519853535198624-
GWHAAZE00000007exon3519899235199060-
GWHAAZE00000007exon3519915935199212-
GWHAAZE00000007exon3519985235199925-
GWHAAZE00000007exon3520001535200078-
GWHAAZE00000007exon3520070535200833-
GWHAAZE00000007exon3520126135201317-
GWHAAZE00000007exon3520165935201725-
GWHAAZE00000007exon3520212335202183-
GWHAAZE00000007exon3520228035202352-
GWHAAZE00000007exon3520272235202770-
GWHAAZE00000007exon3520293435203018-
GWHAAZE00000007exon3520351035203606-
GWHAAZE00000007exon3520410835204263-
GWHAAZE00000007exon3520458935204636-
GWHAAZE00000007exon3520488835204969-
GWHAAZE00000007exon3520512635205202-
GWHAAZE00000007exon3520529935205349-
GWHAAZE00000007CDS3520529935205349-
GWHAAZE00000007CDS3520512635205202-
GWHAAZE00000007CDS3520488835204969-
GWHAAZE00000007CDS3520458935204636-
GWHAAZE00000007CDS3520410835204263-
GWHAAZE00000007CDS3520351035203606-
GWHAAZE00000007CDS3520293435203018-
GWHAAZE00000007CDS3520272235202770-
GWHAAZE00000007CDS3520228035202352-
GWHAAZE00000007CDS3520212335202183-
GWHAAZE00000007CDS3520165935201725-
GWHAAZE00000007CDS3520126135201317-
GWHAAZE00000007CDS3520070535200833-
GWHAAZE00000007CDS3520001535200078-
GWHAAZE00000007CDS3519985235199925-
GWHAAZE00000007CDS3519915935199212-
GWHAAZE00000007CDS3519899235199060-
GWHAAZE00000007CDS3519853535198624-
GWHAAZE00000007CDS3519832535198432-
GWHAAZE00000007CDS3519797335198023-
GWHAAZE00000007three_prime_UTR3519767635197972-
Transcript Sequence

Network for GWHGAAZE024122

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00342.20PGI511702.70E-46
PF00342.20PGI1714912.30E-137
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01810GPI, pgi Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0006094biological_processgluconeogenesis
GO:0006096biological_processglycolytic process
GO:0004347molecular_functionglucose-6-phosphate isomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf54.969
SRR3591706second leaf48.393
SRR3591707mature leaf40.030
SRR3591708Shoot apex43.764
SRR3591709Stem51.059
SRR3591710White floral bud52.938
SRR3591711White flower57.063
SRR3591712Green floral bud59.306
SRR3591713Yellow flower77.157
SRP173429 SRR8316895Juvenile bud stage 46.266
SRR8316896Juvenile bud stage 76.245
SRR8316897Juvenile bud stage 39.942
SRR8316894Third green stage 31.838
SRR8316900Third green stage 87.546
SRR8316901Third green stage 85.337
SRR8316898Complete white stage 32.626
SRR8316899Complete white stage 73.489
SRR8316903Complete white stage 52.909
SRR8316902Silver flowering stage31.984
SRR8316904Silver flowering stage44.916
SRR8316905Silver flowering stage24.774
SRR8316906Gold flowering stage 79.876
SRR8316907Gold flowering stage 76.981
SRR8316908Gold flowering stage 69.771
SRP132670SRR6706286Control52.862
SRR6706287Light intensity 50%57.556
SRR6706288Light intensity 20%63.783
CNP0000432CNS0095592Slightly white alabastrum(diploid) 163.374
CNS0095593Slightly white alabastrum(diploid) 255.287
CNS0095594Slightly white alabastrum(diploid) 359.857
CNS0095595Whole white alabastrum(diploid) 257.647
CNS0095596Whole white alabastrum(diploid) 356.557
CNS0095597Whole white alabastrum(diploid) 454.213
CNS0095598Silvery flower (diploied) 149.122
CNS0095599Silvery flower (diploied) 246.693
CNS0095600Silvery flower (diploied) 348.647
CNS0095601Golden flower (diploid) 146.974
CNS0095602Golden flower (diploid) 247.647
CNS0095603Golden flower (diploid) 347.178
CNS0095604Slightly white alabastrum(tetraploid) 154.398
CNS0095605Slightly white alabastrum(tetraploid) 247.630
CNS0095606Slightly white alabastrum(tetraploid) 349.957
CNS0095607Whole white alabastrum(tetraploid) 144.281
CNS0095608Whole white alabastrum(tetraploid) 249.369
CNS0095609Whole white alabastrum(tetraploid) 360.522
CNS0095610Silvery flower (tetraploid) 152.552
CNS0095611Silvery flower (tetraploid) 243.875
CNS0095612Silvery flower (tetraploid) 349.884
CNS0095613Golden flower (tetraploid) 144.309
CNS0095614Golden flower (tetraploid) 255.646
CNS0095615Golden flower (tetraploid) 354.164
CRA001975CRR073297Stem 158.061
CRR073298Stem 250.713
CRR073299Stem 345.669
CRR073300Leaf 161.814
CRR073301Leaf 266.191
CRR073302Leaf 348.851
CRR073303Juvenile bud 157.495
CRR073304Juvenile bud 238.276
CRR073305Juvenile bud 346.656
CRR073306Third green 122.623
CRR073307Third green 218.368
CRR073308Third green 322.657
CRR073309Second white 131.968
CRR073310Second white 234.015
CRR073311Second white 336.889
CRR073312Silver flowering 136.497
CRR073313Silver flowering 232.065
CRR073314Silver flowering 333.925
CRR073315Gold flowering 126.405
CRR073316Gold flowering 237.021
CRR073317Gold flowering 323.908
CRR073318Tawny withering 128.754
CRR073319Tawny withering 234.380
CRR073320Tawny withering 333.372