Detail information of GWHGAAZE023996


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004250336.10PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2 [Solanum lycopersicum]
COGYP_004253406.18E-20TIR protein
Swissprottr|Q56YP2|PI5K1_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 1
trEMBLtr|K4D6C2|K4D6C2_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc11g013180.1.1}
TAIR10AT1G21980.10phosphatidylinositol-4-phosphate 5-kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3224714732251176-
GWHAAZE00000007mRNA3224714732251176-
GWHAAZE00000007exon3224714732247456-
GWHAAZE00000007exon3224811132248204-
GWHAAZE00000007exon3224829332248423-
GWHAAZE00000007exon3224851132248703-
GWHAAZE00000007exon3224880132248924-
GWHAAZE00000007exon3224907832249243-
GWHAAZE00000007exon3224937532249539-
GWHAAZE00000007exon3224965932250334-
GWHAAZE00000007exon3225060032251176-
GWHAAZE00000007CDS3225060032251176-
GWHAAZE00000007CDS3224965932250334-
GWHAAZE00000007CDS3224937532249539-
GWHAAZE00000007CDS3224907832249243-
GWHAAZE00000007CDS3224880132248924-
GWHAAZE00000007CDS3224851132248703-
GWHAAZE00000007CDS3224829332248423-
GWHAAZE00000007CDS3224811132248204-
GWHAAZE00000007CDS3224714732247456-
Transcript Sequence

Network for GWHGAAZE023996

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.21MORN871091.30E-05
PF02493.21MORN1101314.10E-07
PF02493.21MORN2152377.00E-07
PF02493.21MORN2382591.70E-07
PF01504.19PIP5K4938052.80E-88
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488biological_processphosphatidylinositol metabolic process
GO:0016307molecular_functionphosphatidylinositol phosphate kinase activity
GO:0005524molecular_functionATP binding
GO:0016308molecular_function1-phosphatidylinositol-4-phosphate 5-kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.488
SRR3591706second leaf8.929
SRR3591707mature leaf8.440
SRR3591708Shoot apex5.235
SRR3591709Stem3.575
SRR3591710White floral bud10.461
SRR3591711White flower8.839
SRR3591712Green floral bud5.218
SRR3591713Yellow flower7.320
SRP173429 SRR8316895Juvenile bud stage 3.314
SRR8316896Juvenile bud stage 3.474
SRR8316897Juvenile bud stage 0.389
SRR8316894Third green stage 1.915
SRR8316900Third green stage 3.181
SRR8316901Third green stage 2.824
SRR8316898Complete white stage 2.874
SRR8316899Complete white stage 3.911
SRR8316903Complete white stage 6.274
SRR8316902Silver flowering stage2.137
SRR8316904Silver flowering stage3.746
SRR8316905Silver flowering stage2.215
SRR8316906Gold flowering stage 6.654
SRR8316907Gold flowering stage 5.056
SRR8316908Gold flowering stage 4.538
SRP132670SRR6706286Control4.872
SRR6706287Light intensity 50%4.710
SRR6706288Light intensity 20%4.318
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.114
CNS0095593Slightly white alabastrum(diploid) 22.566
CNS0095594Slightly white alabastrum(diploid) 33.893
CNS0095595Whole white alabastrum(diploid) 22.285
CNS0095596Whole white alabastrum(diploid) 32.252
CNS0095597Whole white alabastrum(diploid) 42.096
CNS0095598Silvery flower (diploied) 13.359
CNS0095599Silvery flower (diploied) 21.659
CNS0095600Silvery flower (diploied) 33.315
CNS0095601Golden flower (diploid) 11.938
CNS0095602Golden flower (diploid) 23.837
CNS0095603Golden flower (diploid) 35.086
CNS0095604Slightly white alabastrum(tetraploid) 11.123
CNS0095605Slightly white alabastrum(tetraploid) 21.540
CNS0095606Slightly white alabastrum(tetraploid) 32.583
CNS0095607Whole white alabastrum(tetraploid) 11.132
CNS0095608Whole white alabastrum(tetraploid) 21.216
CNS0095609Whole white alabastrum(tetraploid) 31.851
CNS0095610Silvery flower (tetraploid) 11.830
CNS0095611Silvery flower (tetraploid) 21.182
CNS0095612Silvery flower (tetraploid) 32.070
CNS0095613Golden flower (tetraploid) 10.898
CNS0095614Golden flower (tetraploid) 21.931
CNS0095615Golden flower (tetraploid) 33.734
CRA001975CRR073297Stem 17.686
CRR073298Stem 27.133
CRR073299Stem 38.464
CRR073300Leaf 15.650
CRR073301Leaf 24.796
CRR073302Leaf 33.935
CRR073303Juvenile bud 13.783
CRR073304Juvenile bud 24.673
CRR073305Juvenile bud 34.728
CRR073306Third green 123.998
CRR073307Third green 215.802
CRR073308Third green 319.816
CRR073309Second white 17.103
CRR073310Second white 29.553
CRR073311Second white 35.726
CRR073312Silver flowering 12.472
CRR073313Silver flowering 23.468
CRR073314Silver flowering 34.154
CRR073315Gold flowering 12.932
CRR073316Gold flowering 26.033
CRR073317Gold flowering 31.902
CRR073318Tawny withering 12.928
CRR073319Tawny withering 22.896
CRR073320Tawny withering 33.867