Detail information of GWHGAAZE023857


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007222246.10hypothetical protein PRUPE_ppa004713mg [Prunus persica]
COGYP_004254713.18E-24Legumain
Swissprottr|P49043|VPE_CITSI0Vacuolar-processing enzyme (Precursor)
trEMBLtr|M5XW87|M5XW87_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23445.1}
TAIR10AT4G32940.10gamma vacuolar processing enzyme

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2824704928253923-
GWHAAZE00000007mRNA2824704928253923-
GWHAAZE00000007exon2825370228253923-
GWHAAZE00000007exon2825242728252591-
GWHAAZE00000007exon2825219328252349-
GWHAAZE00000007exon2825136628251451-
GWHAAZE00000007exon2825108328251282-
GWHAAZE00000007exon2825026528250313-
GWHAAZE00000007exon2824906728249276-
GWHAAZE00000007exon2824834128248547-
GWHAAZE00000007exon2824704928247231-
GWHAAZE00000007CDS2825370228253923-
GWHAAZE00000007CDS2825242728252591-
GWHAAZE00000007CDS2825219328252349-
GWHAAZE00000007CDS2825136628251451-
GWHAAZE00000007CDS2825108328251282-
GWHAAZE00000007CDS2825026528250313-
GWHAAZE00000007CDS2824906728249276-
GWHAAZE00000007CDS2824834128248547-
GWHAAZE00000007CDS2824704928247231-
Transcript Sequence

Network for GWHGAAZE023857

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01650.19Peptidase_C13573278.60E-114
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01369LGMN Lysosome map04142
Antigen processing and presentationmap04612

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0008233molecular_functionpeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf85.386
SRR3591706second leaf25.481
SRR3591707mature leaf9.386
SRR3591708Shoot apex36.566
SRR3591709Stem50.733
SRR3591710White floral bud78.161
SRR3591711White flower24.911
SRR3591712Green floral bud177.335
SRR3591713Yellow flower13.436
SRP173429 SRR8316895Juvenile bud stage 23.243
SRR8316896Juvenile bud stage 43.835
SRR8316897Juvenile bud stage 22.883
SRR8316894Third green stage 22.918
SRR8316900Third green stage 80.812
SRR8316901Third green stage 66.530
SRR8316898Complete white stage 28.111
SRR8316899Complete white stage 56.848
SRR8316903Complete white stage 35.586
SRR8316902Silver flowering stage5.835
SRR8316904Silver flowering stage17.972
SRR8316905Silver flowering stage4.788
SRR8316906Gold flowering stage 8.900
SRR8316907Gold flowering stage 10.145
SRR8316908Gold flowering stage 10.384
SRP132670SRR6706286Control84.650
SRR6706287Light intensity 50%100.995
SRR6706288Light intensity 20%104.431
CNP0000432CNS0095592Slightly white alabastrum(diploid) 141.880
CNS0095593Slightly white alabastrum(diploid) 245.117
CNS0095594Slightly white alabastrum(diploid) 345.868
CNS0095595Whole white alabastrum(diploid) 254.696
CNS0095596Whole white alabastrum(diploid) 356.695
CNS0095597Whole white alabastrum(diploid) 459.146
CNS0095598Silvery flower (diploied) 118.977
CNS0095599Silvery flower (diploied) 218.437
CNS0095600Silvery flower (diploied) 319.531
CNS0095601Golden flower (diploid) 113.640
CNS0095602Golden flower (diploid) 216.681
CNS0095603Golden flower (diploid) 314.791
CNS0095604Slightly white alabastrum(tetraploid) 163.002
CNS0095605Slightly white alabastrum(tetraploid) 260.951
CNS0095606Slightly white alabastrum(tetraploid) 346.112
CNS0095607Whole white alabastrum(tetraploid) 176.328
CNS0095608Whole white alabastrum(tetraploid) 281.097
CNS0095609Whole white alabastrum(tetraploid) 3154.442
CNS0095610Silvery flower (tetraploid) 122.336
CNS0095611Silvery flower (tetraploid) 218.888
CNS0095612Silvery flower (tetraploid) 322.550
CNS0095613Golden flower (tetraploid) 19.554
CNS0095614Golden flower (tetraploid) 216.889
CNS0095615Golden flower (tetraploid) 311.732
CRA001975CRR073297Stem 138.910
CRR073298Stem 247.343
CRR073299Stem 346.796
CRR073300Leaf 160.297
CRR073301Leaf 253.997
CRR073302Leaf 368.562
CRR073303Juvenile bud 161.940
CRR073304Juvenile bud 262.196
CRR073305Juvenile bud 375.651
CRR073306Third green 122.326
CRR073307Third green 230.249
CRR073308Third green 336.595
CRR073309Second white 113.886
CRR073310Second white 27.146
CRR073311Second white 36.281
CRR073312Silver flowering 17.932
CRR073313Silver flowering 211.295
CRR073314Silver flowering 35.137
CRR073315Gold flowering 112.532
CRR073316Gold flowering 28.571
CRR073317Gold flowering 312.124
CRR073318Tawny withering 120.707
CRR073319Tawny withering 215.272
CRR073320Tawny withering 324.093