Detail information of GWHGAAZE023709


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU29331.15.67394E-27hypothetical protein MIMGU_mgv1a008438mg [Erythranthe guttata]
COGNP_394664.10.000007nitrilase
Swissprottr|Q8RUF8|NILP3_ARATH7E-25Omega-amidase,chloroplastic (Precursor)
trEMBLtr|A0A022QN03|A0A022QN03_ERYGU2E-27Uncharacterized protein {ECO:0000313|EMBL:EYU29331.1}
TAIR10AT5G12040.11E-20Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2343078423431076-
GWHAAZE00000007mRNA2343078423431076-
GWHAAZE00000007exon2343078423430871-
GWHAAZE00000007exon2343098523431076-
GWHAAZE00000007CDS2343098523431076-
GWHAAZE00000007CDS2343078423430871-
Transcript Sequence

Network for GWHGAAZE023709

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13566NIT2, yafV Metabolic pathways map01100
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.052
SRR3591706second leaf38.854
SRR3591707mature leaf23.093
SRR3591708Shoot apex56.466
SRR3591709Stem75.264
SRR3591710White floral bud48.752
SRR3591711White flower52.815
SRR3591712Green floral bud68.725
SRR3591713Yellow flower45.498
SRP173429 SRR8316895Juvenile bud stage 21.847
SRR8316896Juvenile bud stage 46.900
SRR8316897Juvenile bud stage 20.043
SRR8316894Third green stage 19.531
SRR8316900Third green stage 41.104
SRR8316901Third green stage 60.770
SRR8316898Complete white stage 24.948
SRR8316899Complete white stage 67.931
SRR8316903Complete white stage 31.205
SRR8316902Silver flowering stage23.256
SRR8316904Silver flowering stage17.854
SRR8316905Silver flowering stage11.654
SRR8316906Gold flowering stage 39.559
SRR8316907Gold flowering stage 25.901
SRR8316908Gold flowering stage 43.304
SRP132670SRR6706286Control35.580
SRR6706287Light intensity 50%40.683
SRR6706288Light intensity 20%48.960
CNP0000432CNS0095592Slightly white alabastrum(diploid) 165.603
CNS0095593Slightly white alabastrum(diploid) 237.027
CNS0095594Slightly white alabastrum(diploid) 337.041
CNS0095595Whole white alabastrum(diploid) 232.425
CNS0095596Whole white alabastrum(diploid) 331.884
CNS0095597Whole white alabastrum(diploid) 440.521
CNS0095598Silvery flower (diploied) 128.840
CNS0095599Silvery flower (diploied) 226.985
CNS0095600Silvery flower (diploied) 328.452
CNS0095601Golden flower (diploid) 125.070
CNS0095602Golden flower (diploid) 222.868
CNS0095603Golden flower (diploid) 329.411
CNS0095604Slightly white alabastrum(tetraploid) 158.976
CNS0095605Slightly white alabastrum(tetraploid) 254.668
CNS0095606Slightly white alabastrum(tetraploid) 3100.854
CNS0095607Whole white alabastrum(tetraploid) 162.182
CNS0095608Whole white alabastrum(tetraploid) 243.986
CNS0095609Whole white alabastrum(tetraploid) 357.958
CNS0095610Silvery flower (tetraploid) 131.133
CNS0095611Silvery flower (tetraploid) 245.098
CNS0095612Silvery flower (tetraploid) 334.339
CNS0095613Golden flower (tetraploid) 154.594
CNS0095614Golden flower (tetraploid) 230.133
CNS0095615Golden flower (tetraploid) 323.305
CRA001975CRR073297Stem 125.156
CRR073298Stem 230.090
CRR073299Stem 320.602
CRR073300Leaf 125.631
CRR073301Leaf 234.726
CRR073302Leaf 325.525
CRR073303Juvenile bud 128.769
CRR073304Juvenile bud 215.767
CRR073305Juvenile bud 327.188
CRR073306Third green 115.785
CRR073307Third green 213.064
CRR073308Third green 314.598
CRR073309Second white 111.643
CRR073310Second white 214.830
CRR073311Second white 32.407
CRR073312Silver flowering 17.514
CRR073313Silver flowering 211.029
CRR073314Silver flowering 38.383
CRR073315Gold flowering 112.201
CRR073316Gold flowering 211.058
CRR073317Gold flowering 314.537
CRR073318Tawny withering 121.366
CRR073319Tawny withering 227.427
CRR073320Tawny withering 326.346