Gene detail

Detail information of GWHGAAZE023691

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP34032.1	0	hypothetical protein JCGZ_07603 [Jatropha curcas]
COG	YP_007093009.1	9E-74	FAD linked oxidase domain-containing protein
Swissprot	tr\|Q9FUJ1\|CKX7_ARATH	0	Cytokinin dehydrogenase 7
trEMBL	tr\|A0A067KD15\|A0A067KD15_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP34032.1}
TAIR10	AT5G21482.1	0	cytokinin oxidase 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	22370274	22375945	-
GWHAAZE00000007	mRNA	22370274	22375945	-
GWHAAZE00000007	exon	22370274	22370592	-
GWHAAZE00000007	exon	22372417	22372676	-
GWHAAZE00000007	exon	22374462	22374503	-
GWHAAZE00000007	exon	22374592	22374870	-
GWHAAZE00000007	exon	22375268	22375945	-
GWHAAZE00000007	CDS	22375268	22375945	-
GWHAAZE00000007	CDS	22374592	22374870	-
GWHAAZE00000007	CDS	22374462	22374503	-
GWHAAZE00000007	CDS	22372417	22372676	-
GWHAAZE00000007	CDS	22370274	22370592	-

Transcript Sequence
>GWHTAAZE023721 ATGATAGCCTATCTAGAGCACTTCGTTCACGAAAACGACGTCGAATCCAGACCAGACAATTACGAAATTGACATTCAAGGCACCATCGACGACAAATCAACCGATTTCGCCGCTAAAGACTTCGGCGGAATGCTCGCCGGGAAGCCTCTCGCCGTCGTCAGGCCTTCCGGCGCCGACGACATCTCCAGGGTGATAAAGTACGCCTCACGGTCGGAAAACCTAACGGTCGCCGCCAGAGGCAACGGCCACTCGATTAACGGCCAGGCGATGGCGGACAAAGGTCTGGTCATCGACATGAGGTCAATTGAGGGCGAAATCTCCGTCGTCGGGTTTAACGGCGGCGCCTCCTACGCCGTTGATGTTAATGGAGGGGCATTATGGGAAGATGTATTGAAACGGTGCGTTTTGAGGCGCGGTTTGGCTCCGAGGTCTTGGACGGACTATCTTGGTTTGACGGTCGGCGGGACTTTATCTAACGCCGGCGTTAGTGGCCAGACTTTCCGTTACGGCCCCCAAACGTCGAATGTAACGGAGTTGGAGGTTGTAACGGGTAAAGGGGATAAAATTGTTTGTTCTGAAAATCAAAATTCGGAATTATTTTTCTCTGTTCTTGGAGGTCTTGGTCAGTTCGGTATAATTACTAGAGCTAGGGTTTTGCTTCAACCTGCCCCGGACATGGTGAGGTGGATAAGGGTGATATACACCGAGTTTGCCGAGTTTACTCGGGACGCCGAGTCGCTGGTGACTCGGCCGGAGGGTGAGTCGTTTGACTACGTGGAAGGGTTCGTATTCGTGAACAGTTATGATGACCCGGTAAACGGGTGGGCATCGGTGGCTTTGGATCCGGACCAGTTGTTGGACCCGACCCGGATACCAAGAACAGCTGGACCTGTTGTATACTGTCTGGAGGTGGCATTACATTACCAAAAAGTGGACCGTTCATCAACTGTGGATACGGATATAAAAAATCTAATCTTGAAAATGTGGGGGAGATTACAGGTGGAGAGATTGCTTGGAGGGCTGAGATATTGCAAAGGGTTGAGATTTGAGGTGGACCTGAACTACATGGAATTCCTGATGAGGGTGAAGCGTGCAGAGCAACAGGCGAAGGCTAACGGTATATGGGATGCCCCACACCCTTGGCTTAACCTCTTTGTGTCCAAGAAAGACATAGCTGGTTTTGATCGTCTGGTTTTCAAAAACATCTTGAAGCATGGCGTTGGTGGCCCCATGCTGGTCTACCCACTCGTCCGTTCCAAGTGGGATGATCGGACATCTGTGGTGTTGCCGGACGGAGATATCTTCTATATAGTGGCATTACTCCGATCAAGTCCTCCGTATCCGAACGGACCACCCGTGGAAGAATTGGTGTCTCAAAATTGTGAAATCATCCAAACTTGTATTAAAAACGGGTTCAATTTCAAACTTTACTTTCCCCACTACAACTCCAAAGAGGATTGGAAGAAACATTTTGGGAATCAATGGACGCGATTTGTCGAAAGAAAGGAAACCTTCGATCCGTTGGCCATCCTTGCTCCCGGACAGAAAATTTTCACAAGGAATTGCCAACTACCCTAA

Network for GWHGAAZE023691

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01565.24	FAD_binding_4	49	191	2.70E-23
PF09265.11	Cytokin-bind	224	518	9.80E-106

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00279	CKX	Zeatin biosynthesis	map00908

Gene Ontology

GO term	Ontology	Name
GO:0009690	biological_process	cytokinin metabolic process
GO:0055114	biological_process	oxidation-reduction process
GO:0019139	molecular_function	cytokinin dehydrogenase activity
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0003824	molecular_function	catalytic activity
GO:0071949	molecular_function	FAD binding
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	26.390
	SRR3591706	second leaf	18.439
	SRR3591707	mature leaf	35.453
	SRR3591708	Shoot apex	9.218
	SRR3591709	Stem	36.908
	SRR3591710	White floral bud	24.485
	SRR3591711	White flower	33.445
	SRR3591712	Green floral bud	19.955
	SRR3591713	Yellow flower	12.249
SRP173429	SRR8316895	Juvenile bud stage	20.588
	SRR8316896	Juvenile bud stage	32.985
	SRR8316897	Juvenile bud stage	13.273
	SRR8316894	Third green stage	22.550
	SRR8316900	Third green stage	80.088
	SRR8316901	Third green stage	76.092
	SRR8316898	Complete white stage	21.344
	SRR8316899	Complete white stage	55.767
	SRR8316903	Complete white stage	26.280
	SRR8316902	Silver flowering stage	10.114
	SRR8316904	Silver flowering stage	12.351
	SRR8316905	Silver flowering stage	8.408
	SRR8316906	Gold flowering stage	8.688
	SRR8316907	Gold flowering stage	13.781
	SRR8316908	Gold flowering stage	14.952
SRP132670	SRR6706286	Control	88.103
	SRR6706287	Light intensity 50%	78.727
	SRR6706288	Light intensity 20%	76.482
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	26.149
	CNS0095593	Slightly white alabastrum(diploid) 2	33.107
	CNS0095594	Slightly white alabastrum(diploid) 3	16.747
	CNS0095595	Whole white alabastrum(diploid) 2	23.194
	CNS0095596	Whole white alabastrum(diploid) 3	18.882
	CNS0095597	Whole white alabastrum(diploid) 4	13.490
	CNS0095598	Silvery flower (diploied) 1	12.931
	CNS0095599	Silvery flower (diploied) 2	10.186
	CNS0095600	Silvery flower (diploied) 3	33.845
	CNS0095601	Golden flower (diploid) 1	4.504
	CNS0095602	Golden flower (diploid) 2	9.563
	CNS0095603	Golden flower (diploid) 3	9.336
	CNS0095604	Slightly white alabastrum(tetraploid) 1	44.013
	CNS0095605	Slightly white alabastrum(tetraploid) 2	36.120
	CNS0095606	Slightly white alabastrum(tetraploid) 3	75.821
	CNS0095607	Whole white alabastrum(tetraploid) 1	25.325
	CNS0095608	Whole white alabastrum(tetraploid) 2	24.376
	CNS0095609	Whole white alabastrum(tetraploid) 3	47.990
	CNS0095610	Silvery flower (tetraploid) 1	19.907
	CNS0095611	Silvery flower (tetraploid) 2	14.532
	CNS0095612	Silvery flower (tetraploid) 3	42.337
	CNS0095613	Golden flower (tetraploid) 1	9.338
	CNS0095614	Golden flower (tetraploid) 2	9.721
	CNS0095615	Golden flower (tetraploid) 3	12.011
CRA001975	CRR073297	Stem 1	42.654
	CRR073298	Stem 2	57.026
	CRR073299	Stem 3	44.325
	CRR073300	Leaf 1	73.406
	CRR073301	Leaf 2	101.384
	CRR073302	Leaf 3	50.341
	CRR073303	Juvenile bud 1	38.634
	CRR073304	Juvenile bud 2	31.959
	CRR073305	Juvenile bud 3	89.937
	CRR073306	Third green 1	105.934
	CRR073307	Third green 2	106.157
	CRR073308	Third green 3	78.877
	CRR073309	Second white 1	51.073
	CRR073310	Second white 2	40.388
	CRR073311	Second white 3	30.182
	CRR073312	Silver flowering 1	42.218
	CRR073313	Silver flowering 2	41.594
	CRR073314	Silver flowering 3	51.603
	CRR073315	Gold flowering 1	96.540
	CRR073316	Gold flowering 2	107.932
	CRR073317	Gold flowering 3	40.662
	CRR073318	Tawny withering 1	20.224
	CRR073319	Tawny withering 2	6.936
	CRR073320	Tawny withering 3	20.919