Gene detail

Detail information of GWHGAAZE023631

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007040900.1	7.074E-101	Pectinacetylesterase family protein [Theobroma cacao]
trEMBL	tr\|A0A061G739\|A0A061G739_THECC	3E-101	Pectinacetylesterase family protein {ECO:0000313\|EMBL:EOY25401.1}
TAIR10	AT4G19410.2	7E-80	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	19129162	19131887	+
GWHAAZE00000007	mRNA	19129162	19131887	+
GWHAAZE00000007	exon	19129162	19129254	+
GWHAAZE00000007	exon	19129342	19129474	+
GWHAAZE00000007	exon	19129565	19129635	+
GWHAAZE00000007	exon	19129773	19129859	+
GWHAAZE00000007	exon	19129987	19130111	+
GWHAAZE00000007	exon	19130226	19130288	+
GWHAAZE00000007	exon	19130415	19130468	+
GWHAAZE00000007	exon	19130553	19130631	+
GWHAAZE00000007	exon	19130744	19130852	+
GWHAAZE00000007	exon	19131393	19131552	+
GWHAAZE00000007	exon	19131636	19131887	+
GWHAAZE00000007	CDS	19129162	19129254	+
GWHAAZE00000007	CDS	19129342	19129474	+
GWHAAZE00000007	CDS	19129565	19129635	+
GWHAAZE00000007	CDS	19129773	19129859	+
GWHAAZE00000007	CDS	19129987	19130111	+
GWHAAZE00000007	CDS	19130226	19130288	+
GWHAAZE00000007	CDS	19130415	19130468	+
GWHAAZE00000007	CDS	19130553	19130631	+
GWHAAZE00000007	CDS	19130744	19130852	+
GWHAAZE00000007	CDS	19131393	19131552	+
GWHAAZE00000007	CDS	19131636	19131768	+
GWHAAZE00000007	three_prime_UTR	19131769	19131887	+

Transcript Sequence
>GWHTAAZE023661 ATGTTGTTAGTCTGTCTTGACGGAAGTCCACCAGCGTACCAGTTTGACGAGGGGAAAGGAGAAGGAACCAACAATTGGTTGGTTCACTTAGAGGGCGGTGGATGGTGTAATTCAGTAAGATCGTGCTCAGGCCGTTCAAATGACTCAACTGGTTTGGGTTCATCTAATAAAATGGTACCAAGAGGTTTCTATGGGATTCTGAGCAGCTCAAAGAAAGACAATCCAAACTTCTATAAGTGGAATAGAATTTTGGTGAGATATTGTGATGGATCTTCATTTACTGGGGATGCCGAGAAAGGGTCCAAAGTTTATCTGAGAGGAGCAAGGGTATTTGATGCAATCATGGAAGATCTCTTGGAAAGAGGAATGAAGGATGCATCAAATGCTCTTCTCTCTGGATGCTCAGCTGGTGGTTTGGCATCTATCATGCACTGTGATAAATTCCGAGCTTTAATAGCCACCACAGCTCGAGTTAAATGCCTTTCCGATGGTGGTTATTTCCTCCACGGGAAAGATGTGTATGGAGGCTATCACTTTGAGTATCGACATTTGATCAAGTTGTTGGCGCATACGGGTCTGCAAAGAATTTGCCACAGACTTGTACTTCAAAGATCAAACCAAGTTTGTGCTTCTACCCACAAAAGCGTCATTCAACATATCCGCACTCCATTATTTATATTAAACTCAGTCTTTGATAAATGGCAGCTCGAGTACGTTTTCGCCCTAACGTTCCTGCCTATAGTAGGCCGTGCCTGGGTCAAATGCCAAAATAACACGGCCGACTGCTCATTTAGCCAGCTCAAGAGATTGGAAGGTTTACGGTCAGAATTCTTGAACACAATTTTGACTAGGTTGGGTAACCCTTCTTCTAAAGGCTGGTTTATTGATTCTTGTTACACTCATTGCCAATCTTTATCTGGGGAAAGTTGGCATGGACCTCATGTGACATTGAATCACAAGGTACGTAAGACAATACAATTTCAAAGGCCGTTGGGGATTGGTTCTACGACAGACGTGTGGTGCACCTGGTTGATCAACATAAATCGCCACGTTTGTGTGTGCGTGAAAGATGAAAGCCCCAACAGTCCTAACAATAACTGTATCTAGCATTAGTTCTCGGATAACTTTGTAGTATTTTGCGTCTCTTTTGTACTCAAAAGCCTATAATCGAATGTAATTTCAAACTTAATTATCTGCTGTTGGCTTTTTTTATGGGAACTTATTTT

Network for GWHGAAZE023631

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	4	318	1.20E-106

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	1.393
	SRR3591711	White flower	1.060
	SRR3591712	Green floral bud	0.732
	SRR3591713	Yellow flower	0.202
SRP173429	SRR8316895	Juvenile bud stage	0.488
	SRR8316896	Juvenile bud stage	0.117
	SRR8316897	Juvenile bud stage	0.642
	SRR8316894	Third green stage	0.349
	SRR8316900	Third green stage	0.971
	SRR8316901	Third green stage	0.822
	SRR8316898	Complete white stage	0.343
	SRR8316899	Complete white stage	3.927
	SRR8316903	Complete white stage	1.820
	SRR8316902	Silver flowering stage	0.693
	SRR8316904	Silver flowering stage	0.762
	SRR8316905	Silver flowering stage	0.136
	SRR8316906	Gold flowering stage	0.386
	SRR8316907	Gold flowering stage	0.409
	SRR8316908	Gold flowering stage	0.573
SRP132670	SRR6706286	Control	1.272
	SRR6706287	Light intensity 50%	1.320
	SRR6706288	Light intensity 20%	1.323
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.139
	CNS0095593	Slightly white alabastrum(diploid) 2	1.530
	CNS0095594	Slightly white alabastrum(diploid) 3	0.640
	CNS0095595	Whole white alabastrum(diploid) 2	1.677
	CNS0095596	Whole white alabastrum(diploid) 3	0.390
	CNS0095597	Whole white alabastrum(diploid) 4	1.862
	CNS0095598	Silvery flower (diploied) 1	3.161
	CNS0095599	Silvery flower (diploied) 2	1.398
	CNS0095600	Silvery flower (diploied) 3	0.481
	CNS0095601	Golden flower (diploid) 1	2.045
	CNS0095602	Golden flower (diploid) 2	1.022
	CNS0095603	Golden flower (diploid) 3	0.721
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.903
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.051
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.551
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.409
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.167
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.586
	CNS0095610	Silvery flower (tetraploid) 1	3.083
	CNS0095611	Silvery flower (tetraploid) 2	1.006
	CNS0095612	Silvery flower (tetraploid) 3	1.885
	CNS0095613	Golden flower (tetraploid) 1	0.820
	CNS0095614	Golden flower (tetraploid) 2	4.546
	CNS0095615	Golden flower (tetraploid) 3	2.676
CRA001975	CRR073297	Stem 1	0.282
	CRR073298	Stem 2	0.449
	CRR073299	Stem 3	0.166
	CRR073300	Leaf 1	0.578
	CRR073301	Leaf 2	0.608
	CRR073302	Leaf 3	0.542
	CRR073303	Juvenile bud 1	0.813
	CRR073304	Juvenile bud 2	0.642
	CRR073305	Juvenile bud 3	0.438
	CRR073306	Third green 1	0.069
	CRR073307	Third green 2	0.102
	CRR073308	Third green 3	0.412
	CRR073309	Second white 1	0.017
	CRR073310	Second white 2	0.224
	CRR073311	Second white 3	0.039
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.280
	CRR073314	Silver flowering 3	0.207
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000