Gene detail

Detail information of GWHGAAZE023618

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009397056.1	8.8082E-119	PREDICTED: protein notum homolog [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SQ07\|M0SQ07_MUSAM	3E-119	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P18440_001}
TAIR10	AT4G19420.1	3E-93	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	17726941	17729978	+
GWHAAZE00000007	mRNA	17726941	17729978	+
GWHAAZE00000007	exon	17726941	17727061	+
GWHAAZE00000007	exon	17727186	17727268	+
GWHAAZE00000007	exon	17727449	17727581	+
GWHAAZE00000007	exon	17727683	17727762	+
GWHAAZE00000007	exon	17728094	17728218	+
GWHAAZE00000007	exon	17728332	17728395	+
GWHAAZE00000007	exon	17728506	17728559	+
GWHAAZE00000007	exon	17728713	17728790	+
GWHAAZE00000007	exon	17728898	17729006	+
GWHAAZE00000007	exon	17729551	17729696	+
GWHAAZE00000007	exon	17729790	17729978	+
GWHAAZE00000007	CDS	17726941	17727061	+
GWHAAZE00000007	CDS	17727186	17727268	+
GWHAAZE00000007	CDS	17727449	17727581	+
GWHAAZE00000007	CDS	17727683	17727762	+
GWHAAZE00000007	CDS	17728094	17728218	+
GWHAAZE00000007	CDS	17728332	17728395	+
GWHAAZE00000007	CDS	17728506	17728559	+
GWHAAZE00000007	CDS	17728713	17728790	+
GWHAAZE00000007	CDS	17728898	17729006	+
GWHAAZE00000007	CDS	17729551	17729696	+
GWHAAZE00000007	CDS	17729790	17729888	+
GWHAAZE00000007	three_prime_UTR	17729889	17729978	+

Transcript Sequence
>GWHTAAZE023648 ATGGAGTATACAACATTCTCCTACCTTCTTGTTGTTCTACTAATTGTATTGATCCAAGCCAATGCTTCCCCTGTGGCTGTTGATCTCACACGTGTCTACGCTGCTGCTGCCAAAGGAGCAGTTTGTCTTGACGGAAGTCTGCCAGCCTATCAGTTTGACAAGGGAAATAGAAAAGGAATCAACAATTGGTTGGTTCACTTAGAGGGTGGTGGATGGTGTAACTCAGTAGCAAAGTGCTTAGACCGTTCACGTGATCCAACTGGTTTGGGGTCTTCTAACAGGATGGTACCAGTAGGTTTCCATGGGATTCTGAGCAACTCGAAGAAAGAAAATCCAAACTTCTATAACTGGAATAGAATTTTGGTTAGATATTGTGATGGATCATCATTTACCGGTGATGCAGTGAAAGTTCATAATGCTCTTCTCTCTGGATGCTCAGCTGGTGGTTTGGCATCTATCATGCACTGTGATAAATTCCGAACATTAATAGCCACCACAGCTAGAGTAAAATGCCTTTCCGATGGTGGTTATTTTCTCCATGGGAAAGATGCGTATGGAGGCTATCACTTTGAATATGCGACTTTCGATCAAGTTGTTGGCGTACATGGGTCTGTGAAGAATTTGCCACAAACTTGTACTTCAAAGATTAAACCAAGTTTGTGCTTCTACCCACAAAACGTCATTCAACATATTCGCACTCCATTATTCATTTTAAACTCAGTCTTTGATAAATGGCAGATTGAGTACGTTTTCGCACTAACGTACCTGCCTATAGTAGGCCGTGCCTGGGTCAAATGCCAAAATAACACGGCCGACTGCTCATCTAGCCAACTCAAGAGATTGGAAGGTTTACGGTCAGAATTCCTGAACACAATTCTGACTAGGTTGGGTAACCCTTCCTCTAAAGGCTGGTTTGTCCATTCTTGTTACACTCATTGCCAATCTGTATCCGGGGACAGTTGGCTTGGACCTAATGTGACATTGAATCACAAGACAATTTCCAAGGCCGTTGGGGATTGGTTCTACGACAGACGTGTGGTGCACCTGGTTGATCAACATAACTCGCCACGTTTGTGTGTGCATGAAAAATGAAAGTCCCAACAGTGCTAACAAGAACTATAACTTGCATTAGTTCTTGTATAAGTTTGTAGTATTTTGCACGTAATTTCAAACTTAATTATC

Network for GWHGAAZE023618

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	21	135	1.60E-45
PF03283.14	PAE	137	345	8.30E-67

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.772
	SRR3591711	White flower	0.601
	SRR3591712	Green floral bud	1.797
	SRR3591713	Yellow flower	0.150
SRP173429	SRR8316895	Juvenile bud stage	1.999
	SRR8316896	Juvenile bud stage	2.732
	SRR8316897	Juvenile bud stage	0.747
	SRR8316894	Third green stage	0.578
	SRR8316900	Third green stage	0.845
	SRR8316901	Third green stage	0.404
	SRR8316898	Complete white stage	0.739
	SRR8316899	Complete white stage	2.170
	SRR8316903	Complete white stage	1.432
	SRR8316902	Silver flowering stage	0.097
	SRR8316904	Silver flowering stage	0.014
	SRR8316905	Silver flowering stage	0.075
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.627
	SRR6706287	Light intensity 50%	0.738
	SRR6706288	Light intensity 20%	0.627
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.020
	CNS0095593	Slightly white alabastrum(diploid) 2	1.548
	CNS0095594	Slightly white alabastrum(diploid) 3	2.197
	CNS0095595	Whole white alabastrum(diploid) 2	0.220
	CNS0095596	Whole white alabastrum(diploid) 3	0.635
	CNS0095597	Whole white alabastrum(diploid) 4	0.327
	CNS0095598	Silvery flower (diploied) 1	0.135
	CNS0095599	Silvery flower (diploied) 2	0.110
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.289
	CNS0095602	Golden flower (diploid) 2	0.164
	CNS0095603	Golden flower (diploid) 3	0.033
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.329
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.802
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.289
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.449
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.645
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.425
	CNS0095610	Silvery flower (tetraploid) 1	0.115
	CNS0095611	Silvery flower (tetraploid) 2	0.532
	CNS0095612	Silvery flower (tetraploid) 3	0.149
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.409
	CNS0095615	Golden flower (tetraploid) 3	0.315
CRA001975	CRR073297	Stem 1	5.482
	CRR073298	Stem 2	3.169
	CRR073299	Stem 3	5.464
	CRR073300	Leaf 1	0.777
	CRR073301	Leaf 2	0.456
	CRR073302	Leaf 3	0.818
	CRR073303	Juvenile bud 1	1.765
	CRR073304	Juvenile bud 2	1.161
	CRR073305	Juvenile bud 3	1.429
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.048
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.139
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000