Detail information of GWHGAAZE023132


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283468.11.8347E-156PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
trEMBLtr|D7SXA8|D7SXA8_VITVI7E-157Putative uncharacterized protein {ECO:0000313|EMBL:CBI22205.3}
TAIR10AT5G15240.15E-89Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene116386118819-
GWHAAZE00000007mRNA116386118819-
GWHAAZE00000007exon116386116541-
GWHAAZE00000007exon116625116777-
GWHAAZE00000007exon117210117904-
GWHAAZE00000007exon118648118819-
GWHAAZE00000007CDS118648118819-
GWHAAZE00000007CDS117210117904-
GWHAAZE00000007CDS116625116777-
GWHAAZE00000007CDS116386116541-
Transcript Sequence

Network for GWHGAAZE023132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans823378.60E-45
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.999
SRR3591706second leaf0.408
SRR3591707mature leaf0.403
SRR3591708Shoot apex1.056
SRR3591709Stem0.162
SRR3591710White floral bud1.762
SRR3591711White flower6.355
SRR3591712Green floral bud2.251
SRR3591713Yellow flower6.355
SRP173429 SRR8316895Juvenile bud stage 1.742
SRR8316896Juvenile bud stage 0.665
SRR8316897Juvenile bud stage 0.738
SRR8316894Third green stage 0.139
SRR8316900Third green stage 1.316
SRR8316901Third green stage 0.663
SRR8316898Complete white stage 2.283
SRR8316899Complete white stage 10.318
SRR8316903Complete white stage 2.693
SRR8316902Silver flowering stage24.652
SRR8316904Silver flowering stage44.476
SRR8316905Silver flowering stage21.571
SRR8316906Gold flowering stage 82.362
SRR8316907Gold flowering stage 77.274
SRR8316908Gold flowering stage 79.828
SRP132670SRR6706286Control0.265
SRR6706287Light intensity 50%0.169
SRR6706288Light intensity 20%0.340
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.690
CNS0095593Slightly white alabastrum(diploid) 21.120
CNS0095594Slightly white alabastrum(diploid) 32.987
CNS0095595Whole white alabastrum(diploid) 21.837
CNS0095596Whole white alabastrum(diploid) 31.235
CNS0095597Whole white alabastrum(diploid) 40.917
CNS0095598Silvery flower (diploied) 12.929
CNS0095599Silvery flower (diploied) 26.835
CNS0095600Silvery flower (diploied) 311.429
CNS0095601Golden flower (diploid) 14.670
CNS0095602Golden flower (diploid) 28.813
CNS0095603Golden flower (diploid) 37.624
CNS0095604Slightly white alabastrum(tetraploid) 11.452
CNS0095605Slightly white alabastrum(tetraploid) 20.981
CNS0095606Slightly white alabastrum(tetraploid) 31.094
CNS0095607Whole white alabastrum(tetraploid) 12.053
CNS0095608Whole white alabastrum(tetraploid) 21.948
CNS0095609Whole white alabastrum(tetraploid) 31.181
CNS0095610Silvery flower (tetraploid) 15.300
CNS0095611Silvery flower (tetraploid) 25.283
CNS0095612Silvery flower (tetraploid) 370.143
CNS0095613Golden flower (tetraploid) 19.575
CNS0095614Golden flower (tetraploid) 25.181
CNS0095615Golden flower (tetraploid) 320.640
CRA001975CRR073297Stem 10.760
CRR073298Stem 20.433
CRR073299Stem 32.098
CRR073300Leaf 10.378
CRR073301Leaf 20.760
CRR073302Leaf 31.156
CRR073303Juvenile bud 10.786
CRR073304Juvenile bud 21.404
CRR073305Juvenile bud 30.481
CRR073306Third green 1126.730
CRR073307Third green 277.035
CRR073308Third green 377.390
CRR073309Second white 1293.448
CRR073310Second white 2220.335
CRR073311Second white 3191.489
CRR073312Silver flowering 1146.392
CRR073313Silver flowering 2185.611
CRR073314Silver flowering 3138.073
CRR073315Gold flowering 10.139
CRR073316Gold flowering 22.211
CRR073317Gold flowering 32.927
CRR073318Tawny withering 12.407
CRR073319Tawny withering 213.565
CRR073320Tawny withering 30.752