Gene detail

Detail information of GWHGAAZE022394

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002277006.1	0	PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
COG	YP_005368415.1	8E-28	cytochrome P450
Swissprot	tr\|Q9FMY1\|C86B1_ARATH	0	Cytochrome P450 86B1
trEMBL	tr\|F6HF53\|F6HF53_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB50993.1}
TAIR10	AT5G23190.1	0	cytochrome P450, family 86, subfamily B, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	71785782	71787904	-
GWHAAZE00000006	mRNA	71785782	71787904	-
GWHAAZE00000006	exon	71786660	71787904	-
GWHAAZE00000006	exon	71786056	71786185	-
GWHAAZE00000006	exon	71785782	71785975	-
GWHAAZE00000006	CDS	71786660	71787904	-
GWHAAZE00000006	CDS	71786056	71786185	-
GWHAAZE00000006	CDS	71785782	71785975	-

Transcript Sequence
>GWHTAAZE022424 ATGACTAACCCTAGCAACTCCTCTTCCTTTCTCTCCTCCAGCCACACCGCCGGAGCTTTTTCCCTCCGGCAAGGACTTTTCTCCCTACCGGAGATCCAGGTTTTGGAACTTTGTTTGGCACTTCTTGTTTTTATCACGATACATTCTTTGAGACAGAAAAAACACCATGGCCTACCCGTTTGGCCTATTGTTGGTATGTTGCCTTCTTTGGTCTCCGGTCTTCGTGTCGACCTGTACGAATGGATCTCCAACATACTCTGCCATCGGAACGGGACTTTCACGTTCAAGGGTCCTTCGTTTACCAACCTAAATTGTGTCGTAACTTCGGATCCTCGTAACTTGGAGCACATTTTAAAGTCAAAGTTCTCTATTTATCCTAAAGGGGAGTATTTTCGGCACTCCCTTCGCGATCTCCTAGGTAACGGCATTTTCAATGCTGACGATGAAATTTGGCAACGCCAAAGGAAGACGGCGAGCATTGAGTTCCACTCGGCCAAGTTTAGGAACTTGACCACCGAATCACTCCTCGAGCTTGTCCACAGAAGGCTCTTGCCAGTGTTAGAAACCTCGATCCACCAATCGACTGCCATTGATTTGCAAGACATTTTGTTACGATTAACGTTTGACAACGTGTGCATTATAGCATTTGGAGTGGACCCTGGATGCTTAAGGCCCGGCTTGCCAGAAATCCCATTTGCTCAGGCCTTCGAGGCGGCGACAGAGGCAACTATCATGCGCTTTGTTATGCCTACGCTTATATGGAAGGCTATGAGGTACTTCAATTTGGGTAGTGAGAAGAAACTAAAGGAGTCTATTAAAGGGGTTGATTTGTTTGCTAATGAAGTCATCAGAAAGAGGAAGGAGGAGATTTTCTTGGAGAGTGAGGATAAGAAACAAAGGTCAGATTTGTTGACGATATTTATGAGGTTGAAGGATGAAAATGGGGAGGCCTTTTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATACTGGCCGGAAGGGACACTTCATCGGTAGCATTGAGCTGGTTTTTCTGGCTGATTGACCGGAATCCGACGGTTGAGGAGAGGATTCTTGAGGAGATATTTGGAATAGTTGGTGAAAGGGGAGATTCAAATAAGAGAGGGAGTGAAAATGAATTTGTATTCAAGGCAGAGGAGGTGAAGAAGATGCACTATTTGCAGGCTGCTCTATCAGAGTCTTTGAGATTGTACCCTTCAGTGCCTGTGGATCACAAGGAGGTTGCTGAAGATGATGTATTCCCTGATGGCACGGTGTTGAAGAAAGGGACAAAAGTAGTGTACGCGATCTATGCCATGGGACGAATGGAGGCGATATGGGGAAAGACTGCCAAGAATTTAAGCCGGAGAGGCAAGGATTTTGCTTATTACCAAATGAAATTTGCCGCTGCCTCTATCTTGTATCGTTATCGCGTAAAGGTGGTTGAAAATCATCTAGCTGTACCGAAGCTAGCATTGACCATGTACATGAAACATGGATTGAAGGTTAAACTTTGTAGACGCGATGAATCCGATCTTCAGAAATACCTCAAGACGAGAATTTGA

Network for GWHGAAZE022394

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	103	449	2.00E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15402	CYP86B1	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.156
	SRR3591708	Shoot apex	0.090
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.320
	SRR3591712	Green floral bud	0.063
	SRR3591713	Yellow flower	0.400
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.543
	SRR8316897	Juvenile bud stage	0.159
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.594
	SRR8316901	Third green stage	0.288
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.115
	SRR8316903	Complete white stage	0.038
	SRR8316902	Silver flowering stage	0.982
	SRR8316904	Silver flowering stage	1.217
	SRR8316905	Silver flowering stage	0.029
	SRR8316906	Gold flowering stage	0.198
	SRR8316907	Gold flowering stage	0.070
	SRR8316908	Gold flowering stage	1.930
SRP132670	SRR6706286	Control	0.513
	SRR6706287	Light intensity 50%	0.557
	SRR6706288	Light intensity 20%	0.382
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.002
	CNS0095593	Slightly white alabastrum(diploid) 2	0.238
	CNS0095594	Slightly white alabastrum(diploid) 3	0.637
	CNS0095595	Whole white alabastrum(diploid) 2	0.054
	CNS0095596	Whole white alabastrum(diploid) 3	0.030
	CNS0095597	Whole white alabastrum(diploid) 4	0.112
	CNS0095598	Silvery flower (diploied) 1	0.175
	CNS0095599	Silvery flower (diploied) 2	0.605
	CNS0095600	Silvery flower (diploied) 3	0.193
	CNS0095601	Golden flower (diploid) 1	0.088
	CNS0095602	Golden flower (diploid) 2	0.239
	CNS0095603	Golden flower (diploid) 3	0.190
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.046
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.107
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.042
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.201
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.679
	CNS0095610	Silvery flower (tetraploid) 1	0.682
	CNS0095611	Silvery flower (tetraploid) 2	0.101
	CNS0095612	Silvery flower (tetraploid) 3	0.253
	CNS0095613	Golden flower (tetraploid) 1	0.044
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.035
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.065
	CRR073300	Leaf 1	0.109
	CRR073301	Leaf 2	0.063
	CRR073302	Leaf 3	0.044
	CRR073303	Juvenile bud 1	0.297
	CRR073304	Juvenile bud 2	1.992
	CRR073305	Juvenile bud 3	0.153
	CRR073306	Third green 1	0.027
	CRR073307	Third green 2	0.033
	CRR073308	Third green 3	0.464
	CRR073309	Second white 1	0.051
	CRR073310	Second white 2	0.048
	CRR073311	Second white 3	0.044
	CRR073312	Silver flowering 1	0.158
	CRR073313	Silver flowering 2	0.772
	CRR073314	Silver flowering 3	0.834
	CRR073315	Gold flowering 1	0.056
	CRR073316	Gold flowering 2	0.300
	CRR073317	Gold flowering 3	0.482
	CRR073318	Tawny withering 1	32.155
	CRR073319	Tawny withering 2	7.308
	CRR073320	Tawny withering 3	45.522