Detail information of GWHGAAZE021759


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010090915.12.4504E-132Imidazoleglycerol-phosphate dehydratase [Morus notabilis]
COGYP_007092083.11E-91imidazoleglycerol-phosphate dehydratase
Swissprottr|Q43072|HIS7_PEA2E-130Imidazoleglycerol-phosphate dehydratase
trEMBLtr|W9QM52|W9QM52_9ROSA9E-133Imidazoleglycerol-phosphate dehydratase {ECO:0000256|RuleBase:RU000598}
TAIR10AT4G14910.32E-102HISTIDINE BIOSYNTHESIS 5B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6085195560857392-
GWHAAZE00000006mRNA6085195560857392-
GWHAAZE00000006exon6085730860857392-
GWHAAZE00000006exon6085708760857214-
GWHAAZE00000006exon6085588160855985-
GWHAAZE00000006exon6085555060855642-
GWHAAZE00000006exon6085461060854684-
GWHAAZE00000006exon6085365960853721-
GWHAAZE00000006exon6085320060853309-
GWHAAZE00000006exon6085263360852675-
GWHAAZE00000006exon6085230860852380-
GWHAAZE00000006exon6085195560852224-
GWHAAZE00000006CDS6085730860857392-
GWHAAZE00000006CDS6085708760857214-
GWHAAZE00000006CDS6085588160855985-
GWHAAZE00000006CDS6085555060855642-
GWHAAZE00000006CDS6085461060854684-
GWHAAZE00000006CDS6085365960853721-
GWHAAZE00000006CDS6085320060853309-
GWHAAZE00000006CDS6085263360852675-
GWHAAZE00000006CDS6085231860852380-
GWHAAZE00000006three_prime_UTR6085230860852317-
GWHAAZE00000006three_prime_UTR6085195560852224-
Transcript Sequence

Network for GWHGAAZE021759

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00475.19IGPD612041.40E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01693hisB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName
GO:0000105biological_processhistidine biosynthetic process
GO:0004424molecular_functionimidazoleglycerol-phosphate dehydratase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.956
SRR3591706second leaf32.242
SRR3591707mature leaf28.666
SRR3591708Shoot apex36.266
SRR3591709Stem23.801
SRR3591710White floral bud24.020
SRR3591711White flower34.311
SRR3591712Green floral bud25.828
SRR3591713Yellow flower37.371
SRP173429 SRR8316895Juvenile bud stage 22.959
SRR8316896Juvenile bud stage 30.689
SRR8316897Juvenile bud stage 16.146
SRR8316894Third green stage 12.025
SRR8316900Third green stage 43.019
SRR8316901Third green stage 39.006
SRR8316898Complete white stage 17.087
SRR8316899Complete white stage 39.076
SRR8316903Complete white stage 26.010
SRR8316902Silver flowering stage18.757
SRR8316904Silver flowering stage22.915
SRR8316905Silver flowering stage15.188
SRR8316906Gold flowering stage 41.174
SRR8316907Gold flowering stage 35.300
SRR8316908Gold flowering stage 34.585
SRP132670SRR6706286Control33.233
SRR6706287Light intensity 50%34.168
SRR6706288Light intensity 20%37.298
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.034
CNS0095593Slightly white alabastrum(diploid) 223.277
CNS0095594Slightly white alabastrum(diploid) 325.465
CNS0095595Whole white alabastrum(diploid) 219.925
CNS0095596Whole white alabastrum(diploid) 323.363
CNS0095597Whole white alabastrum(diploid) 417.938
CNS0095598Silvery flower (diploied) 129.517
CNS0095599Silvery flower (diploied) 228.736
CNS0095600Silvery flower (diploied) 338.953
CNS0095601Golden flower (diploid) 124.428
CNS0095602Golden flower (diploid) 235.412
CNS0095603Golden flower (diploid) 334.420
CNS0095604Slightly white alabastrum(tetraploid) 126.252
CNS0095605Slightly white alabastrum(tetraploid) 226.363
CNS0095606Slightly white alabastrum(tetraploid) 330.083
CNS0095607Whole white alabastrum(tetraploid) 114.558
CNS0095608Whole white alabastrum(tetraploid) 216.921
CNS0095609Whole white alabastrum(tetraploid) 337.135
CNS0095610Silvery flower (tetraploid) 143.100
CNS0095611Silvery flower (tetraploid) 249.261
CNS0095612Silvery flower (tetraploid) 341.090
CNS0095613Golden flower (tetraploid) 134.470
CNS0095614Golden flower (tetraploid) 242.518
CNS0095615Golden flower (tetraploid) 347.477
CRA001975CRR073297Stem 137.689
CRR073298Stem 234.660
CRR073299Stem 339.118
CRR073300Leaf 133.439
CRR073301Leaf 233.808
CRR073302Leaf 340.680
CRR073303Juvenile bud 142.456
CRR073304Juvenile bud 237.272
CRR073305Juvenile bud 334.142
CRR073306Third green 118.915
CRR073307Third green 219.247
CRR073308Third green 318.161
CRR073309Second white 137.153
CRR073310Second white 233.064
CRR073311Second white 328.803
CRR073312Silver flowering 126.624
CRR073313Silver flowering 225.220
CRR073314Silver flowering 327.118
CRR073315Gold flowering 142.015
CRR073316Gold flowering 255.585
CRR073317Gold flowering 338.861
CRR073318Tawny withering 124.427
CRR073319Tawny withering 223.615
CRR073320Tawny withering 326.585