Detail information of GWHGAAZE021755


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004247661.18.11559E-52PREDICTED: transcription repressor OFP12-like [Solanum lycopersicum]
Swissprottr|F4I8R6|OFP12_ARATH2E-30Transcription repressor OFP12
trEMBLtr|K4CVI5|K4CVI5_SOLLC3E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc09g082080.1.1}
TAIR10AT1G05420.12E-21ovate family protein 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene6081334760813754+
GWHAAZE00000006mRNA6081334760813754+
GWHAAZE00000006exon6081334760813754+
GWHAAZE00000006CDS6081334760813754+
Transcript Sequence

Network for GWHGAAZE021755

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.14Ovate531132.80E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.231
SRR3591706second leaf2.961
SRR3591707mature leaf0.405
SRR3591708Shoot apex0.446
SRR3591709Stem0.266
SRR3591710White floral bud3.654
SRR3591711White flower2.171
SRR3591712Green floral bud0.551
SRR3591713Yellow flower0.470
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.286
SRR8316897Juvenile bud stage 0.013
SRR8316894Third green stage 0.231
SRR8316900Third green stage 0.838
SRR8316901Third green stage 0.951
SRR8316898Complete white stage 5.895
SRR8316899Complete white stage 0.800
SRR8316903Complete white stage 6.941
SRR8316902Silver flowering stage0.804
SRR8316904Silver flowering stage1.801
SRR8316905Silver flowering stage1.232
SRR8316906Gold flowering stage 0.451
SRR8316907Gold flowering stage 1.198
SRR8316908Gold flowering stage 3.032
SRP132670SRR6706286Control0.671
SRR6706287Light intensity 50%1.165
SRR6706288Light intensity 20%1.346
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.170
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.149
CNS0095595Whole white alabastrum(diploid) 20.307
CNS0095596Whole white alabastrum(diploid) 30.287
CNS0095597Whole white alabastrum(diploid) 40.250
CNS0095598Silvery flower (diploied) 10.186
CNS0095599Silvery flower (diploied) 21.716
CNS0095600Silvery flower (diploied) 31.892
CNS0095601Golden flower (diploid) 10.116
CNS0095602Golden flower (diploid) 21.475
CNS0095603Golden flower (diploid) 30.056
CNS0095604Slightly white alabastrum(tetraploid) 10.652
CNS0095605Slightly white alabastrum(tetraploid) 20.092
CNS0095606Slightly white alabastrum(tetraploid) 32.589
CNS0095607Whole white alabastrum(tetraploid) 11.189
CNS0095608Whole white alabastrum(tetraploid) 20.072
CNS0095609Whole white alabastrum(tetraploid) 30.374
CNS0095610Silvery flower (tetraploid) 16.931
CNS0095611Silvery flower (tetraploid) 24.790
CNS0095612Silvery flower (tetraploid) 32.970
CNS0095613Golden flower (tetraploid) 11.757
CNS0095614Golden flower (tetraploid) 22.429
CNS0095615Golden flower (tetraploid) 30.129
CRA001975CRR073297Stem 10.976
CRR073298Stem 20.930
CRR073299Stem 31.133
CRR073300Leaf 10.889
CRR073301Leaf 20.999
CRR073302Leaf 30.268
CRR073303Juvenile bud 11.075
CRR073304Juvenile bud 23.296
CRR073305Juvenile bud 31.803
CRR073306Third green 14.329
CRR073307Third green 22.831
CRR073308Third green 33.599
CRR073309Second white 10.542
CRR073310Second white 20.000
CRR073311Second white 30.215
CRR073312Silver flowering 10.154
CRR073313Silver flowering 21.145
CRR073314Silver flowering 30.013
CRR073315Gold flowering 10.141
CRR073316Gold flowering 20.912
CRR073317Gold flowering 30.000
CRR073318Tawny withering 15.704
CRR073319Tawny withering 22.554
CRR073320Tawny withering 37.017