Gene detail

Detail information of GWHGAAZE020602

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	0	CYP79D33 [Maesa lanceolata]
COG	YP_007126612.1	1E-13	Unspecific monooxygenase
Swissprot	tr\|Q6J541\|C79D3_LOTJA	3E-174	Isoleucine N-monooxygenase 1
trEMBL	tr\|U5FT09\|U5FT09_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:ERP54353.1}
TAIR10	AT5G35917.1	3E-133	cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	12221822	12223354	+
GWHAAZE00000006	mRNA	12221822	12223354	+
GWHAAZE00000006	exon	12221822	12222643	+
GWHAAZE00000006	exon	12222734	12222847	+
GWHAAZE00000006	exon	12222893	12223103	+
GWHAAZE00000006	exon	12223191	12223354	+
GWHAAZE00000006	CDS	12221822	12222643	+
GWHAAZE00000006	CDS	12222734	12222847	+
GWHAAZE00000006	CDS	12222893	12223103	+
GWHAAZE00000006	CDS	12223191	12223354	+

Transcript Sequence
>GWHTAAZE020626 ATGGGATGGCCTATTATCGGGAGCCTACACGTATTGTTTACATGCAAACCTATATTTCGATGGATTCATAGGCTCATGCGTGAGATGAATACAGAAATCATATGTATCCGCTTCCTAAACACCCATGTCATCGTTGTGTCTAGCGATGATTTGGCAAAAGAGTTCTTAAAGACACAAGACGCTGTGTTTTCTTCAAGACCTATTTCTTTAGCTTCTGAAATCACCAGTGGTGGATACATGGCAACTATCTTTAGTCCCATGGGAGAGCAATGGAAAAAAATGAGGAGAATCCTTGCCACTGAAATCCTTTCCAAGAATAGACACAAGTGGCTTCTGAACAAGAGAAATGAAGAGGCCGACTACTTAGTCCACCATGTCTACAACCAAGCATGTAGCAGCTTGACTGGGGGAATTGTCAATGTGAGGGTCATTACTCAGCATTATTGTGGTAATCTGATTAGAAAATTGATATTTAACAAGCGATTCTTTGGAGCTGGGATGCAAGATGGAGGACCAGGAGCTGAAGAAGAAGAGCATATCAACGCGGTCTTCTCAATACTCAAGTACACATTTTCTTTTTGTGTTTCTGATTATGTTGGATTTTTACGTGGACGGTTTGATTTAGATGGTCAAGAAAAAAACATCAGAAAGGCAGTTGAAAGTGTGAGGAAGTATCAAGATCCTTTAATAGACAAAAGAGCTCAACAATGGGCGAAAGGAACCAAGACAGTGAAAGAAGACTTGCTTGATGTCATGATCTCTCTCCAGAGTGAAGCGGGCATGACTTTGTTGTCCGTTGATGAGATTAAAGCCCAAGTTATTGAAATGATGCTGGCATCGGTGGACAATCCATCGAATGCAGTTGAGTGGGCACTTGCAGAAATGATAAATCGAACTGAGACACTTCAAAGGGCAGTAGAAGAATTAGATAGAGTGAACTACATTAAGTCATGTGTAAGGGAGGCCTTTAGACTCCATCCTTTTGTAGCTTTTAATGTGCCGCATGTATCCATGTCTGATACGACAGTCGCTGGCTACTTCATACCAAAGGGTAGCCATGTTATTTTGAGTCGATCAGGTCTTGGACGCAACCCAAAAATCTGGGATGACCCACTGACCTTTAATCCAGAGCGACACCTGAGGGACGGTTCAACAATGACAACAATGCTACTAGCGAGACTTCTTCAATGCTTCACCTGGAGCGCTCCACCTACCGAGCCATGCATTGACCTTAGTGAGTCATATGACAGTTTGGGTATGGCGAAACCTTTACATGCACACGCCAGGCCGCGTTTGGGAGATAATTTGTAT

Network for GWHGAAZE020602

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	3	382	1.60E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.053
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.029
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.025
	SRR3591711	White flower	3.510
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	6.260
SRP173429	SRR8316895	Juvenile bud stage	0.699
	SRR8316896	Juvenile bud stage	0.383
	SRR8316897	Juvenile bud stage	0.435
	SRR8316894	Third green stage	0.201
	SRR8316900	Third green stage	0.465
	SRR8316901	Third green stage	0.177
	SRR8316898	Complete white stage	2.299
	SRR8316899	Complete white stage	0.669
	SRR8316903	Complete white stage	1.822
	SRR8316902	Silver flowering stage	1811.400
	SRR8316904	Silver flowering stage	2645.280
	SRR8316905	Silver flowering stage	1785.205
	SRR8316906	Gold flowering stage	5693.388
	SRR8316907	Gold flowering stage	5652.155
	SRR8316908	Gold flowering stage	3915.424
SRP132670	SRR6706286	Control	0.117
	SRR6706287	Light intensity 50%	0.063
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.500
	CNS0095593	Slightly white alabastrum(diploid) 2	0.515
	CNS0095594	Slightly white alabastrum(diploid) 3	1.056
	CNS0095595	Whole white alabastrum(diploid) 2	0.395
	CNS0095596	Whole white alabastrum(diploid) 3	0.466
	CNS0095597	Whole white alabastrum(diploid) 4	0.589
	CNS0095598	Silvery flower (diploied) 1	63.492
	CNS0095599	Silvery flower (diploied) 2	86.175
	CNS0095600	Silvery flower (diploied) 3	991.170
	CNS0095601	Golden flower (diploid) 1	204.884
	CNS0095602	Golden flower (diploid) 2	625.662
	CNS0095603	Golden flower (diploid) 3	615.964
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.194
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.079
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.319
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.692
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.265
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.039
	CNS0095610	Silvery flower (tetraploid) 1	275.176
	CNS0095611	Silvery flower (tetraploid) 2	502.757
	CNS0095612	Silvery flower (tetraploid) 3	5329.203
	CNS0095613	Golden flower (tetraploid) 1	528.340
	CNS0095614	Golden flower (tetraploid) 2	343.169
	CNS0095615	Golden flower (tetraploid) 3	1109.049
CRA001975	CRR073297	Stem 1	9.860
	CRR073298	Stem 2	9.080
	CRR073299	Stem 3	10.029
	CRR073300	Leaf 1	7.008
	CRR073301	Leaf 2	7.056
	CRR073302	Leaf 3	13.121
	CRR073303	Juvenile bud 1	8.808
	CRR073304	Juvenile bud 2	6.980
	CRR073305	Juvenile bud 3	9.577
	CRR073306	Third green 1	7471.309
	CRR073307	Third green 2	4083.902
	CRR073308	Third green 3	4629.881
	CRR073309	Second white 1	13174.875
	CRR073310	Second white 2	10807.567
	CRR073311	Second white 3	11452.806
	CRR073312	Silver flowering 1	9390.352
	CRR073313	Silver flowering 2	8610.593
	CRR073314	Silver flowering 3	7114.686
	CRR073315	Gold flowering 1	2.586
	CRR073316	Gold flowering 2	1.442
	CRR073317	Gold flowering 3	0.994
	CRR073318	Tawny withering 1	2.008
	CRR073319	Tawny withering 2	1.744
	CRR073320	Tawny withering 3	0.357