Detail information of GWHGAAZE019779


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009593986.18.33234E-93PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Nicotiana tomentosiformis]
Swissprottr|Q9LU68|CIA2_ARATH9E-42Protein CHLOROPLAST IMPORT APPARATUS 2 (Precursor)
trEMBLtr|A0A061GY48|A0A061GY48_THECC5E-90Chloroplast import apparatus 2, putative isoform 3 {ECO:0000313|EMBL:EOY32044.1}
TAIR10AT4G25990.21E-26CCT motif family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene6151670661517812+
GWHAAZE00000005mRNA6151670661517812+
GWHAAZE00000005exon6151670661517812+
GWHAAZE00000005CDS6151670661517812+
Transcript Sequence

Network for GWHGAAZE019779

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.768
SRR3591706second leaf19.325
SRR3591707mature leaf20.821
SRR3591708Shoot apex26.774
SRR3591709Stem10.742
SRR3591710White floral bud2.324
SRR3591711White flower6.881
SRR3591712Green floral bud3.766
SRR3591713Yellow flower1.014
SRP173429 SRR8316895Juvenile bud stage 3.473
SRR8316896Juvenile bud stage 10.385
SRR8316897Juvenile bud stage 2.549
SRR8316894Third green stage 2.264
SRR8316900Third green stage 3.614
SRR8316901Third green stage 2.490
SRR8316898Complete white stage 0.463
SRR8316899Complete white stage 2.812
SRR8316903Complete white stage 0.746
SRR8316902Silver flowering stage0.351
SRR8316904Silver flowering stage1.079
SRR8316905Silver flowering stage0.392
SRR8316906Gold flowering stage 0.582
SRR8316907Gold flowering stage 0.359
SRR8316908Gold flowering stage 1.433
SRP132670SRR6706286Control2.929
SRR6706287Light intensity 50%1.736
SRR6706288Light intensity 20%1.381
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.576
CNS0095593Slightly white alabastrum(diploid) 22.865
CNS0095594Slightly white alabastrum(diploid) 32.456
CNS0095595Whole white alabastrum(diploid) 22.156
CNS0095596Whole white alabastrum(diploid) 31.673
CNS0095597Whole white alabastrum(diploid) 41.793
CNS0095598Silvery flower (diploied) 119.618
CNS0095599Silvery flower (diploied) 214.574
CNS0095600Silvery flower (diploied) 33.647
CNS0095601Golden flower (diploid) 120.033
CNS0095602Golden flower (diploid) 29.216
CNS0095603Golden flower (diploid) 39.258
CNS0095604Slightly white alabastrum(tetraploid) 14.463
CNS0095605Slightly white alabastrum(tetraploid) 24.414
CNS0095606Slightly white alabastrum(tetraploid) 36.933
CNS0095607Whole white alabastrum(tetraploid) 13.300
CNS0095608Whole white alabastrum(tetraploid) 21.528
CNS0095609Whole white alabastrum(tetraploid) 32.303
CNS0095610Silvery flower (tetraploid) 16.155
CNS0095611Silvery flower (tetraploid) 29.258
CNS0095612Silvery flower (tetraploid) 31.149
CNS0095613Golden flower (tetraploid) 12.535
CNS0095614Golden flower (tetraploid) 26.220
CNS0095615Golden flower (tetraploid) 30.916
CRA001975CRR073297Stem 15.856
CRR073298Stem 24.998
CRR073299Stem 36.140
CRR073300Leaf 12.443
CRR073301Leaf 22.684
CRR073302Leaf 31.431
CRR073303Juvenile bud 11.514
CRR073304Juvenile bud 20.626
CRR073305Juvenile bud 31.739
CRR073306Third green 10.260
CRR073307Third green 20.026
CRR073308Third green 30.525
CRR073309Second white 10.059
CRR073310Second white 20.482
CRR073311Second white 30.107
CRR073312Silver flowering 10.387
CRR073313Silver flowering 20.168
CRR073314Silver flowering 30.019
CRR073315Gold flowering 17.824
CRR073316Gold flowering 29.907
CRR073317Gold flowering 36.064
CRR073318Tawny withering 17.830
CRR073319Tawny withering 23.345
CRR073320Tawny withering 34.081