Detail information of GWHGAAZE019760


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007041151.15.13585E-49NB-ARC domain-containing disease resistance protein isoform 1 [Theobroma cacao]
Swissprottr|Q9FLB4|DRL31_ARATH6E-18Putative disease resistance protein At5g05400
trEMBLtr|A0A061DX42|A0A061DX42_THECC2E-49NB-ARC domain-containing disease resistance protein isoform 1 {ECO:0000313|EMBL:EOX96982.1}
TAIR10AT1G12210.16E-10RPS5-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene6068062160681589+
GWHAAZE00000005mRNA6068062160681589+
GWHAAZE00000005exon6068062160681589+
GWHAAZE00000005CDS6068062160681589+
Transcript Sequence

Network for GWHGAAZE019760

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00931.23NB-ARC1633083.20E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13459RPS2 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0043531molecular_functionADP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.325
SRR3591706second leaf1.185
SRR3591707mature leaf0.668
SRR3591708Shoot apex1.170
SRR3591709Stem1.146
SRR3591710White floral bud0.305
SRR3591711White flower0.681
SRR3591712Green floral bud0.678
SRR3591713Yellow flower0.565
SRP173429 SRR8316895Juvenile bud stage 1.410
SRR8316896Juvenile bud stage 2.409
SRR8316897Juvenile bud stage 0.194
SRR8316894Third green stage 1.044
SRR8316900Third green stage 3.340
SRR8316901Third green stage 3.223
SRR8316898Complete white stage 0.892
SRR8316899Complete white stage 2.860
SRR8316903Complete white stage 0.879
SRR8316902Silver flowering stage0.531
SRR8316904Silver flowering stage1.041
SRR8316905Silver flowering stage0.491
SRR8316906Gold flowering stage 2.340
SRR8316907Gold flowering stage 1.507
SRR8316908Gold flowering stage 0.351
SRP132670SRR6706286Control3.602
SRR6706287Light intensity 50%3.429
SRR6706288Light intensity 20%3.408
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.328
CNS0095593Slightly white alabastrum(diploid) 20.831
CNS0095594Slightly white alabastrum(diploid) 30.917
CNS0095595Whole white alabastrum(diploid) 20.450
CNS0095596Whole white alabastrum(diploid) 30.367
CNS0095597Whole white alabastrum(diploid) 40.654
CNS0095598Silvery flower (diploied) 11.662
CNS0095599Silvery flower (diploied) 20.851
CNS0095600Silvery flower (diploied) 32.528
CNS0095601Golden flower (diploid) 10.757
CNS0095602Golden flower (diploid) 21.399
CNS0095603Golden flower (diploid) 31.124
CNS0095604Slightly white alabastrum(tetraploid) 11.035
CNS0095605Slightly white alabastrum(tetraploid) 21.056
CNS0095606Slightly white alabastrum(tetraploid) 36.035
CNS0095607Whole white alabastrum(tetraploid) 10.751
CNS0095608Whole white alabastrum(tetraploid) 20.301
CNS0095609Whole white alabastrum(tetraploid) 34.518
CNS0095610Silvery flower (tetraploid) 13.969
CNS0095611Silvery flower (tetraploid) 24.125
CNS0095612Silvery flower (tetraploid) 33.358
CNS0095613Golden flower (tetraploid) 11.253
CNS0095614Golden flower (tetraploid) 25.495
CNS0095615Golden flower (tetraploid) 34.129
CRA001975CRR073297Stem 11.421
CRR073298Stem 21.422
CRR073299Stem 30.607
CRR073300Leaf 11.924
CRR073301Leaf 21.443
CRR073302Leaf 30.725
CRR073303Juvenile bud 10.403
CRR073304Juvenile bud 20.755
CRR073305Juvenile bud 30.640
CRR073306Third green 10.144
CRR073307Third green 20.075
CRR073308Third green 30.198
CRR073309Second white 10.073
CRR073310Second white 20.383
CRR073311Second white 30.419
CRR073312Silver flowering 10.260
CRR073313Silver flowering 20.309
CRR073314Silver flowering 30.388
CRR073315Gold flowering 10.829
CRR073316Gold flowering 21.709
CRR073317Gold flowering 30.879
CRR073318Tawny withering 10.818
CRR073319Tawny withering 21.354
CRR073320Tawny withering 30.491