Detail information of GWHGAAZE019704


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037697.10NB-ARC domain-containing disease resistance protein, putative isoform 1 [Theobroma cacao]
Swissprottr|Q8LKZ8|RPS2_ARATH4E-58Disease resistance protein RPS2
trEMBLtr|A0A061G5B7|A0A061G5B7_THECC0NB-ARC domain-containing disease resistance protein, putative isoform 1 {ECO:0000313|EMBL:EOY22199.1}
TAIR10AT4G26090.16E-56NB-ARC domain-containing disease resistance protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5845709258460223-
GWHAAZE00000005mRNA5845709258460223-
GWHAAZE00000005exon5845709258460223-
GWHAAZE00000005CDS5845709258460223-
Transcript Sequence

Network for GWHGAAZE019704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00931.23NB-ARC1453774.70E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13459RPS2 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0043531molecular_functionADP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.512
SRR3591706second leaf0.445
SRR3591707mature leaf0.919
SRR3591708Shoot apex0.284
SRR3591709Stem1.204
SRR3591710White floral bud0.021
SRR3591711White flower0.097
SRR3591712Green floral bud0.026
SRR3591713Yellow flower0.051
SRP173429 SRR8316895Juvenile bud stage 0.529
SRR8316896Juvenile bud stage 0.991
SRR8316897Juvenile bud stage 0.009
SRR8316894Third green stage 0.292
SRR8316900Third green stage 0.251
SRR8316901Third green stage 0.258
SRR8316898Complete white stage 0.041
SRR8316899Complete white stage 0.465
SRR8316903Complete white stage 0.056
SRR8316902Silver flowering stage0.160
SRR8316904Silver flowering stage0.228
SRR8316905Silver flowering stage0.061
SRR8316906Gold flowering stage 0.326
SRR8316907Gold flowering stage 0.389
SRR8316908Gold flowering stage 0.248
SRP132670SRR6706286Control0.186
SRR6706287Light intensity 50%0.190
SRR6706288Light intensity 20%0.128
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.222
CNS0095593Slightly white alabastrum(diploid) 20.268
CNS0095594Slightly white alabastrum(diploid) 30.283
CNS0095595Whole white alabastrum(diploid) 20.304
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.031
CNS0095598Silvery flower (diploied) 10.677
CNS0095599Silvery flower (diploied) 20.245
CNS0095600Silvery flower (diploied) 30.378
CNS0095601Golden flower (diploid) 10.346
CNS0095602Golden flower (diploid) 20.456
CNS0095603Golden flower (diploid) 30.498
CNS0095604Slightly white alabastrum(tetraploid) 10.268
CNS0095605Slightly white alabastrum(tetraploid) 20.076
CNS0095606Slightly white alabastrum(tetraploid) 30.530
CNS0095607Whole white alabastrum(tetraploid) 10.050
CNS0095608Whole white alabastrum(tetraploid) 20.137
CNS0095609Whole white alabastrum(tetraploid) 30.060
CNS0095610Silvery flower (tetraploid) 10.442
CNS0095611Silvery flower (tetraploid) 20.375
CNS0095612Silvery flower (tetraploid) 30.210
CNS0095613Golden flower (tetraploid) 10.177
CNS0095614Golden flower (tetraploid) 20.200
CNS0095615Golden flower (tetraploid) 30.387
CRA001975CRR073297Stem 10.606
CRR073298Stem 20.478
CRR073299Stem 30.164
CRR073300Leaf 10.344
CRR073301Leaf 20.546
CRR073302Leaf 30.131
CRR073303Juvenile bud 10.080
CRR073304Juvenile bud 20.101
CRR073305Juvenile bud 30.135
CRR073306Third green 10.067
CRR073307Third green 20.062
CRR073308Third green 30.091
CRR073309Second white 10.284
CRR073310Second white 20.322
CRR073311Second white 30.172
CRR073312Silver flowering 10.110
CRR073313Silver flowering 20.125
CRR073314Silver flowering 30.010
CRR073315Gold flowering 10.227
CRR073316Gold flowering 20.332
CRR073317Gold flowering 30.041
CRR073318Tawny withering 10.957
CRR073319Tawny withering 21.225
CRR073320Tawny withering 30.806