Detail information of GWHGAAZE019634


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN77023.10hypothetical protein VITISV_015334 [Vitis vinifera]
Swissprottr|Q9FR37|AMI1_ARATH9E-160Amidase 1
trEMBLtr|A5BL97|A5BL97_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN77023.1}
TAIR10AT1G08980.12E-122amidase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5591717955922308-
GWHAAZE00000005mRNA5591717955922308-
GWHAAZE00000005exon5591717955917331-
GWHAAZE00000005exon5591821755918351-
GWHAAZE00000005exon5591926055919428-
GWHAAZE00000005exon5591959955919746-
GWHAAZE00000005exon5592041855920600-
GWHAAZE00000005exon5592123055921355-
GWHAAZE00000005exon5592144555921585-
GWHAAZE00000005exon5592229955922308-
GWHAAZE00000005CDS5592229955922308-
GWHAAZE00000005CDS5592144555921585-
GWHAAZE00000005CDS5592123055921355-
GWHAAZE00000005CDS5592041855920600-
GWHAAZE00000005CDS5591959955919746-
GWHAAZE00000005CDS5591926055919428-
GWHAAZE00000005CDS5591821755918351-
GWHAAZE00000005CDS5591717955917331-
Transcript Sequence

Network for GWHGAAZE019634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01425.22Amidase9983.40E-36
PF01425.22Amidase2403321.80E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01426E3.5.1.4, amiE Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Arginine and proline metabolismmap00330
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Aminobenzoate degradationmap00627
Styrene degradationmap00643

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.442
SRR3591706second leaf8.851
SRR3591707mature leaf9.777
SRR3591708Shoot apex8.608
SRR3591709Stem5.188
SRR3591710White floral bud2.716
SRR3591711White flower2.890
SRR3591712Green floral bud2.167
SRR3591713Yellow flower2.110
SRP173429 SRR8316895Juvenile bud stage 8.192
SRR8316896Juvenile bud stage 8.224
SRR8316897Juvenile bud stage 8.293
SRR8316894Third green stage 3.999
SRR8316900Third green stage 7.604
SRR8316901Third green stage 9.468
SRR8316898Complete white stage 3.250
SRR8316899Complete white stage 9.005
SRR8316903Complete white stage 4.021
SRR8316902Silver flowering stage2.393
SRR8316904Silver flowering stage3.865
SRR8316905Silver flowering stage1.780
SRR8316906Gold flowering stage 6.133
SRR8316907Gold flowering stage 4.851
SRR8316908Gold flowering stage 6.988
SRP132670SRR6706286Control6.501
SRR6706287Light intensity 50%6.434
SRR6706288Light intensity 20%6.719
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.730
CNS0095593Slightly white alabastrum(diploid) 24.588
CNS0095594Slightly white alabastrum(diploid) 35.480
CNS0095595Whole white alabastrum(diploid) 25.481
CNS0095596Whole white alabastrum(diploid) 37.477
CNS0095597Whole white alabastrum(diploid) 46.447
CNS0095598Silvery flower (diploied) 110.111
CNS0095599Silvery flower (diploied) 29.216
CNS0095600Silvery flower (diploied) 35.674
CNS0095601Golden flower (diploid) 16.435
CNS0095602Golden flower (diploid) 26.663
CNS0095603Golden flower (diploid) 37.005
CNS0095604Slightly white alabastrum(tetraploid) 17.571
CNS0095605Slightly white alabastrum(tetraploid) 26.890
CNS0095606Slightly white alabastrum(tetraploid) 311.444
CNS0095607Whole white alabastrum(tetraploid) 14.541
CNS0095608Whole white alabastrum(tetraploid) 23.661
CNS0095609Whole white alabastrum(tetraploid) 38.259
CNS0095610Silvery flower (tetraploid) 17.806
CNS0095611Silvery flower (tetraploid) 29.787
CNS0095612Silvery flower (tetraploid) 310.724
CNS0095613Golden flower (tetraploid) 17.374
CNS0095614Golden flower (tetraploid) 28.255
CNS0095615Golden flower (tetraploid) 36.981
CRA001975CRR073297Stem 112.141
CRR073298Stem 29.705
CRR073299Stem 38.647
CRR073300Leaf 17.961
CRR073301Leaf 29.781
CRR073302Leaf 36.116
CRR073303Juvenile bud 16.914
CRR073304Juvenile bud 22.541
CRR073305Juvenile bud 35.319
CRR073306Third green 11.316
CRR073307Third green 20.749
CRR073308Third green 31.663
CRR073309Second white 11.378
CRR073310Second white 22.542
CRR073311Second white 31.624
CRR073312Silver flowering 11.390
CRR073313Silver flowering 20.803
CRR073314Silver flowering 31.006
CRR073315Gold flowering 19.355
CRR073316Gold flowering 213.708
CRR073317Gold flowering 35.490
CRR073318Tawny withering 16.689
CRR073319Tawny withering 26.828
CRR073320Tawny withering 35.253