Detail information of GWHGAAZE019633


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGZ15315.15.61963E-33mevalonate kinase [Platycodon grandiflorus]
Swissprottr|P46086|KIME_ARATH2E-23Mevalonate kinase
trEMBLtr|V9PEX2|V9PEX2_9ASTR2E-33Mevalonate kinase {ECO:0000313|EMBL:AGZ15315.1}
TAIR10AT5G27450.37E-12mevalonate kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5585753855859898-
GWHAAZE00000005mRNA5585753855859898-
GWHAAZE00000005exon5585753855857712-
GWHAAZE00000005exon5585976855859898-
GWHAAZE00000005CDS5585976855859898-
GWHAAZE00000005CDS5585753855857712-
Transcript Sequence

Network for GWHGAAZE019633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00869E2.7.1.36, MVK, mvaK1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Terpenoid backbone biosynthesismap00900
Peroxisomemap04146

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.248
SRR3591706second leaf0.662
SRR3591707mature leaf0.226
SRR3591708Shoot apex0.318
SRR3591709Stem0.610
SRR3591710White floral bud0.272
SRR3591711White flower0.137
SRR3591712Green floral bud0.757
SRR3591713Yellow flower0.048
SRP173429 SRR8316895Juvenile bud stage 1.164
SRR8316896Juvenile bud stage 3.108
SRR8316897Juvenile bud stage 1.850
SRR8316894Third green stage 1.597
SRR8316900Third green stage 3.483
SRR8316901Third green stage 4.465
SRR8316898Complete white stage 2.976
SRR8316899Complete white stage 3.856
SRR8316903Complete white stage 0.979
SRR8316902Silver flowering stage0.645
SRR8316904Silver flowering stage2.085
SRR8316905Silver flowering stage0.373
SRR8316906Gold flowering stage 1.116
SRR8316907Gold flowering stage 2.128
SRR8316908Gold flowering stage 1.546
SRP132670SRR6706286Control5.614
SRR6706287Light intensity 50%4.648
SRR6706288Light intensity 20%6.086
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.610
CNS0095593Slightly white alabastrum(diploid) 24.655
CNS0095594Slightly white alabastrum(diploid) 37.141
CNS0095595Whole white alabastrum(diploid) 26.106
CNS0095596Whole white alabastrum(diploid) 37.508
CNS0095597Whole white alabastrum(diploid) 45.682
CNS0095598Silvery flower (diploied) 13.355
CNS0095599Silvery flower (diploied) 24.493
CNS0095600Silvery flower (diploied) 32.060
CNS0095601Golden flower (diploid) 11.113
CNS0095602Golden flower (diploid) 21.947
CNS0095603Golden flower (diploid) 31.612
CNS0095604Slightly white alabastrum(tetraploid) 11.163
CNS0095605Slightly white alabastrum(tetraploid) 21.569
CNS0095606Slightly white alabastrum(tetraploid) 30.085
CNS0095607Whole white alabastrum(tetraploid) 11.217
CNS0095608Whole white alabastrum(tetraploid) 20.011
CNS0095609Whole white alabastrum(tetraploid) 30.809
CNS0095610Silvery flower (tetraploid) 10.180
CNS0095611Silvery flower (tetraploid) 20.063
CNS0095612Silvery flower (tetraploid) 30.040
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.152
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 13.626
CRR073298Stem 21.189
CRR073299Stem 32.958
CRR073300Leaf 13.970
CRR073301Leaf 22.785
CRR073302Leaf 33.142
CRR073303Juvenile bud 11.721
CRR073304Juvenile bud 23.632
CRR073305Juvenile bud 30.909
CRR073306Third green 10.498
CRR073307Third green 20.913
CRR073308Third green 30.065
CRR073309Second white 10.000
CRR073310Second white 21.349
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.070
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.025
CRR073316Gold flowering 21.200
CRR073317Gold flowering 30.451
CRR073318Tawny withering 11.335
CRR073319Tawny withering 20.823
CRR073320Tawny withering 33.056