Detail information of GWHGAAZE019537


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN70572.11.1245E-174hypothetical protein VITISV_027128 [Vitis vinifera]
trEMBLtr|F6HLN3|F6HLN3_VITVI1E-175Putative uncharacterized protein {ECO:0000313|EMBL:CCB55289.1}
TAIR10AT3G57170.12E-90N-acetylglucosaminyl transferase component family protein / Gpi1 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4998310849986734-
GWHAAZE00000005mRNA4998310849986734-
GWHAAZE00000005exon4998310849983612-
GWHAAZE00000005exon4998440549984626-
GWHAAZE00000005exon4998527049985376-
GWHAAZE00000005exon4998615749986297-
GWHAAZE00000005exon4998642649986734-
GWHAAZE00000005CDS4998642649986734-
GWHAAZE00000005CDS4998615749986297-
GWHAAZE00000005CDS4998527049985376-
GWHAAZE00000005CDS4998440549984626-
GWHAAZE00000005CDS4998310849983612-
Transcript Sequence

Network for GWHGAAZE019537

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05024.16Gpi12774264.20E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03860PIGQ, GPI1 Metabolic pathways map01100
Glycosylphosphatidylinositolmap00563

Gene Ontology

GO term OntologyName
GO:0006506biological_processGPI anchor biosynthetic process
GO:0016021cellular_componentintegral component of membrane
GO:0017176molecular_functionphosphatidylinositol N-acetylglucosaminyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.516
SRR3591706second leaf9.456
SRR3591707mature leaf10.242
SRR3591708Shoot apex13.852
SRR3591709Stem23.125
SRR3591710White floral bud11.496
SRR3591711White flower13.280
SRR3591712Green floral bud15.322
SRR3591713Yellow flower13.337
SRP173429 SRR8316895Juvenile bud stage 9.762
SRR8316896Juvenile bud stage 11.823
SRR8316897Juvenile bud stage 5.905
SRR8316894Third green stage 6.859
SRR8316900Third green stage 15.482
SRR8316901Third green stage 13.980
SRR8316898Complete white stage 5.878
SRR8316899Complete white stage 17.154
SRR8316903Complete white stage 10.817
SRR8316902Silver flowering stage5.650
SRR8316904Silver flowering stage11.352
SRR8316905Silver flowering stage3.567
SRR8316906Gold flowering stage 10.121
SRR8316907Gold flowering stage 12.418
SRR8316908Gold flowering stage 17.444
SRP132670SRR6706286Control8.211
SRR6706287Light intensity 50%7.573
SRR6706288Light intensity 20%9.496
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.154
CNS0095593Slightly white alabastrum(diploid) 29.873
CNS0095594Slightly white alabastrum(diploid) 36.264
CNS0095595Whole white alabastrum(diploid) 27.661
CNS0095596Whole white alabastrum(diploid) 37.185
CNS0095597Whole white alabastrum(diploid) 46.240
CNS0095598Silvery flower (diploied) 19.313
CNS0095599Silvery flower (diploied) 28.654
CNS0095600Silvery flower (diploied) 311.182
CNS0095601Golden flower (diploid) 18.578
CNS0095602Golden flower (diploid) 213.546
CNS0095603Golden flower (diploid) 313.000
CNS0095604Slightly white alabastrum(tetraploid) 110.760
CNS0095605Slightly white alabastrum(tetraploid) 27.237
CNS0095606Slightly white alabastrum(tetraploid) 315.311
CNS0095607Whole white alabastrum(tetraploid) 15.351
CNS0095608Whole white alabastrum(tetraploid) 24.135
CNS0095609Whole white alabastrum(tetraploid) 311.305
CNS0095610Silvery flower (tetraploid) 121.382
CNS0095611Silvery flower (tetraploid) 217.549
CNS0095612Silvery flower (tetraploid) 323.879
CNS0095613Golden flower (tetraploid) 114.883
CNS0095614Golden flower (tetraploid) 219.995
CNS0095615Golden flower (tetraploid) 322.056
CRA001975CRR073297Stem 111.151
CRR073298Stem 29.753
CRR073299Stem 34.719
CRR073300Leaf 111.297
CRR073301Leaf 29.102
CRR073302Leaf 34.012
CRR073303Juvenile bud 13.816
CRR073304Juvenile bud 22.018
CRR073305Juvenile bud 34.315
CRR073306Third green 10.591
CRR073307Third green 20.375
CRR073308Third green 31.269
CRR073309Second white 10.870
CRR073310Second white 22.282
CRR073311Second white 33.050
CRR073312Silver flowering 11.130
CRR073313Silver flowering 22.320
CRR073314Silver flowering 31.268
CRR073315Gold flowering 11.668
CRR073316Gold flowering 24.688
CRR073317Gold flowering 31.121
CRR073318Tawny withering 15.818
CRR073319Tawny withering 26.370
CRR073320Tawny withering 38.215