Gene detail

Detail information of GWHGAAZE019092

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN62190.1	0	hypothetical protein VITISV_020113 [Vitis vinifera]
trEMBL	tr\|A5C8P7\|A5C8P7_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN62190.1}
TAIR10	AT3G05910.1	5E-175	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	31592775	31599708	+
GWHAAZE00000005	mRNA	31592775	31599708	+
GWHAAZE00000005	exon	31592775	31592991	+
GWHAAZE00000005	exon	31594868	31594950	+
GWHAAZE00000005	exon	31595182	31595311	+
GWHAAZE00000005	exon	31595448	31595521	+
GWHAAZE00000005	exon	31596007	31596093	+
GWHAAZE00000005	exon	31596206	31596330	+
GWHAAZE00000005	exon	31596440	31596500	+
GWHAAZE00000005	exon	31597355	31597408	+
GWHAAZE00000005	exon	31597530	31597607	+
GWHAAZE00000005	exon	31598155	31598260	+
GWHAAZE00000005	exon	31598535	31598680	+
GWHAAZE00000005	exon	31599601	31599708	+
GWHAAZE00000005	CDS	31592775	31592991	+
GWHAAZE00000005	CDS	31594868	31594950	+
GWHAAZE00000005	CDS	31595182	31595311	+
GWHAAZE00000005	CDS	31595448	31595521	+
GWHAAZE00000005	CDS	31596007	31596093	+
GWHAAZE00000005	CDS	31596206	31596330	+
GWHAAZE00000005	CDS	31596440	31596500	+
GWHAAZE00000005	CDS	31597355	31597408	+
GWHAAZE00000005	CDS	31597530	31597607	+
GWHAAZE00000005	CDS	31598155	31598260	+
GWHAAZE00000005	CDS	31598535	31598680	+
GWHAAZE00000005	CDS	31599601	31599708	+

Transcript Sequence
>GWHTAAZE019114 ATGGGGAAGAATTTGTGCATTTGGGGTTTAATTTTAATTGGGTTGAGCAAATGGGTAAGTGGATTTGAGTACAATGAGATTGAGGAGGAGGAGTATTATAATAGAACAGAGTTGGCATTTCTTGATTCTTCTCTAAATTATGGAGTCTCTGCTGCTGCTAATACACCTCTTATGGTGGGTCTCACTCTCATTCGCAGTGCTGCTGCTAAAGGCGCTGTTTGTTTGGATGGAAGTTTACCTGCGTACCATTTCCATCGTGGATATGGGTCAGGGGCAAACAGTTGGCTCATCCAGTTGGAGGGTGGTGGATGGTGTAACAGCATTAGATCTTGTGTATACCGCAAAAAGACCCGCCGTGGATCATCATACTATATGGAGAAGCAGATACCATTTAGTGGAATATTGAGCAATAGGGCTGAAGAAAATCCAGATTTCTTCAACTGGAATAGAGTAAAGGTTCGTTACTGTGATGGCGCCTCTTTTGCCGGGGACAGTGAAAATAAGGCTGCACAACTGCAATTTAGAGGACAACGTATATGGTGGGCTGCCGTGGAAGATCTAAAGGCAAAGGGGATGCGCTATGCCAAACAGGCTCTGCTTTCCGGGTGCTCGGCCGGTGGTCTAGCTTCTATATTACACTGCGATGAGTTTCGGGGTATTATGCCTAGAAGTACTAAAGTGAAGTGTCTAAGTGATGCCGGACTATTCTTGGATTCGGTTGATGTAGCCGGTGGTCACACACTCAGGAATATATTTTCAGGTGTCGTTAGTTTGCAGGGGTTGCAAAAGAATTTGCCACGTACTTGTACTAACCACCTCGATGCAACTTCGTGCTTCTTCCCTCAGAACTTGATTGCCAACATCAGAACTCCTATGTTTCTTCTCAATGCAGCCTATGATTCGTGGCAGGTCCAGGCCAGCTTAGCTCCACCATCAGCTGATCCTCACGGCTATTGGCTCGAATGCAAATTGAATCATGCCCGTTGTTCAGCTTCACAGATCCAATTCCTTCAAGGATTCAGGAATCATATGTTGAATGTGATGAAAGGCTTCTCAATGAACCAAAAGAATGGGTTATTCGTTAATTCATGTTTTGCTCACTGCCAGTCGGAGAGGCAGGACACATGGTTCGCAGATGATTCCCCTCTTATTGGTAACAAGGGAATTGCGCTAGCCGTGGGAGATTGGTACTTTGACCGATCCGGAATTAGGGCGGTCGACTGTGCGTACCCGTGTGACAAAACTTGTCACAATCTGGTTTTCAAATAA

Network for GWHGAAZE019092

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	54	401	1.30E-162

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	135.037
	SRR3591706	second leaf	280.882
	SRR3591707	mature leaf	247.445
	SRR3591708	Shoot apex	51.691
	SRR3591709	Stem	103.128
	SRR3591710	White floral bud	737.344
	SRR3591711	White flower	626.915
	SRR3591712	Green floral bud	192.665
	SRR3591713	Yellow flower	379.042
SRP173429	SRR8316895	Juvenile bud stage	25.314
	SRR8316896	Juvenile bud stage	28.869
	SRR8316897	Juvenile bud stage	12.494
	SRR8316894	Third green stage	16.142
	SRR8316900	Third green stage	123.045
	SRR8316901	Third green stage	120.098
	SRR8316898	Complete white stage	336.643
	SRR8316899	Complete white stage	214.159
	SRR8316903	Complete white stage	402.949
	SRR8316902	Silver flowering stage	272.233
	SRR8316904	Silver flowering stage	438.780
	SRR8316905	Silver flowering stage	236.985
	SRR8316906	Gold flowering stage	401.873
	SRR8316907	Gold flowering stage	461.788
	SRR8316908	Gold flowering stage	550.067
SRP132670	SRR6706286	Control	108.387
	SRR6706287	Light intensity 50%	129.426
	SRR6706288	Light intensity 20%	133.307
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	26.449
	CNS0095593	Slightly white alabastrum(diploid) 2	38.531
	CNS0095594	Slightly white alabastrum(diploid) 3	18.942
	CNS0095595	Whole white alabastrum(diploid) 2	62.903
	CNS0095596	Whole white alabastrum(diploid) 3	68.470
	CNS0095597	Whole white alabastrum(diploid) 4	44.894
	CNS0095598	Silvery flower (diploied) 1	76.217
	CNS0095599	Silvery flower (diploied) 2	72.071
	CNS0095600	Silvery flower (diploied) 3	303.216
	CNS0095601	Golden flower (diploid) 1	36.989
	CNS0095602	Golden flower (diploid) 2	151.263
	CNS0095603	Golden flower (diploid) 3	141.507
	CNS0095604	Slightly white alabastrum(tetraploid) 1	41.793
	CNS0095605	Slightly white alabastrum(tetraploid) 2	24.460
	CNS0095606	Slightly white alabastrum(tetraploid) 3	94.856
	CNS0095607	Whole white alabastrum(tetraploid) 1	16.250
	CNS0095608	Whole white alabastrum(tetraploid) 2	27.474
	CNS0095609	Whole white alabastrum(tetraploid) 3	101.685
	CNS0095610	Silvery flower (tetraploid) 1	166.713
	CNS0095611	Silvery flower (tetraploid) 2	78.227
	CNS0095612	Silvery flower (tetraploid) 3	209.775
	CNS0095613	Golden flower (tetraploid) 1	106.925
	CNS0095614	Golden flower (tetraploid) 2	111.166
	CNS0095615	Golden flower (tetraploid) 3	81.570
CRA001975	CRR073297	Stem 1	63.120
	CRR073298	Stem 2	66.770
	CRR073299	Stem 3	45.818
	CRR073300	Leaf 1	166.950
	CRR073301	Leaf 2	157.314
	CRR073302	Leaf 3	159.166
	CRR073303	Juvenile bud 1	192.880
	CRR073304	Juvenile bud 2	317.371
	CRR073305	Juvenile bud 3	176.870
	CRR073306	Third green 1	851.486
	CRR073307	Third green 2	771.037
	CRR073308	Third green 3	780.372
	CRR073309	Second white 1	1026.282
	CRR073310	Second white 2	524.138
	CRR073311	Second white 3	296.939
	CRR073312	Silver flowering 1	103.353
	CRR073313	Silver flowering 2	128.470
	CRR073314	Silver flowering 3	91.997
	CRR073315	Gold flowering 1	57.175
	CRR073316	Gold flowering 2	75.479
	CRR073317	Gold flowering 3	49.152
	CRR073318	Tawny withering 1	87.552
	CRR073319	Tawny withering 2	55.548
	CRR073320	Tawny withering 3	70.260