Detail information of GWHGAAZE018941


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037697.10NB-ARC domain-containing disease resistance protein, putative isoform 1 [Theobroma cacao]
Swissprottr|Q9T048|DRL27_ARATH4E-66Disease resistance protein At4g27190
trEMBLtr|A0A061G5B7|A0A061G5B7_THECC0NB-ARC domain-containing disease resistance protein, putative isoform 1 {ECO:0000313|EMBL:EOY22199.1}
TAIR10AT4G27190.15E-56NB-ARC domain-containing disease resistance protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2750858427511637+
GWHAAZE00000005mRNA2750858427511637+
GWHAAZE00000005exon2750858427511637+
GWHAAZE00000005CDS2750858427511637+
Transcript Sequence

Network for GWHGAAZE018941

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00931.23NB-ARC1613951.90E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13459RPS2 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0043531molecular_functionADP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.230
SRR3591706second leaf0.114
SRR3591707mature leaf0.319
SRR3591708Shoot apex0.375
SRR3591709Stem0.351
SRR3591710White floral bud0.152
SRR3591711White flower0.387
SRR3591712Green floral bud0.290
SRR3591713Yellow flower0.191
SRP173429 SRR8316895Juvenile bud stage 6.955
SRR8316896Juvenile bud stage 9.736
SRR8316897Juvenile bud stage 4.187
SRR8316894Third green stage 3.406
SRR8316900Third green stage 7.352
SRR8316901Third green stage 8.302
SRR8316898Complete white stage 1.853
SRR8316899Complete white stage 11.303
SRR8316903Complete white stage 4.830
SRR8316902Silver flowering stage4.328
SRR8316904Silver flowering stage6.946
SRR8316905Silver flowering stage3.522
SRR8316906Gold flowering stage 13.193
SRR8316907Gold flowering stage 10.526
SRR8316908Gold flowering stage 13.176
SRP132670SRR6706286Control5.351
SRR6706287Light intensity 50%5.656
SRR6706288Light intensity 20%5.515
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.646
CNS0095593Slightly white alabastrum(diploid) 23.200
CNS0095594Slightly white alabastrum(diploid) 33.692
CNS0095595Whole white alabastrum(diploid) 22.811
CNS0095596Whole white alabastrum(diploid) 32.219
CNS0095597Whole white alabastrum(diploid) 42.698
CNS0095598Silvery flower (diploied) 114.562
CNS0095599Silvery flower (diploied) 29.687
CNS0095600Silvery flower (diploied) 312.204
CNS0095601Golden flower (diploid) 18.368
CNS0095602Golden flower (diploid) 215.027
CNS0095603Golden flower (diploid) 313.526
CNS0095604Slightly white alabastrum(tetraploid) 13.452
CNS0095605Slightly white alabastrum(tetraploid) 22.525
CNS0095606Slightly white alabastrum(tetraploid) 39.496
CNS0095607Whole white alabastrum(tetraploid) 12.740
CNS0095608Whole white alabastrum(tetraploid) 21.600
CNS0095609Whole white alabastrum(tetraploid) 36.935
CNS0095610Silvery flower (tetraploid) 110.869
CNS0095611Silvery flower (tetraploid) 211.611
CNS0095612Silvery flower (tetraploid) 310.665
CNS0095613Golden flower (tetraploid) 14.613
CNS0095614Golden flower (tetraploid) 210.264
CNS0095615Golden flower (tetraploid) 38.649
CRA001975CRR073297Stem 17.270
CRR073298Stem 28.246
CRR073299Stem 36.707
CRR073300Leaf 17.398
CRR073301Leaf 27.172
CRR073302Leaf 34.444
CRR073303Juvenile bud 14.121
CRR073304Juvenile bud 23.143
CRR073305Juvenile bud 34.821
CRR073306Third green 11.849
CRR073307Third green 20.933
CRR073308Third green 31.471
CRR073309Second white 12.184
CRR073310Second white 21.690
CRR073311Second white 31.011
CRR073312Silver flowering 10.607
CRR073313Silver flowering 21.017
CRR073314Silver flowering 30.966
CRR073315Gold flowering 17.225
CRR073316Gold flowering 210.319
CRR073317Gold flowering 34.846
CRR073318Tawny withering 16.233
CRR073319Tawny withering 25.319
CRR073320Tawny withering 35.827