Gene detail

Detail information of GWHGAAZE018583

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011088202.1	5.8272E-176	PREDICTED: triacylglycerol lipase 1 isoform X1 [Sesamum indicum]
Swissprot	tr\|Q71DJ5\|LIP1_ARATH	5E-160	Triacylglycerol lipase 1 (Precursor)
trEMBL	tr\|K4D7Q5\|K4D7Q5_SOLLC	7E-169	Lipase {ECO:0000256\|PIRNR:PIRNR000862}
TAIR10	AT2G15230.1	6E-129	lipase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	21482590	21486479	-
GWHAAZE00000005	mRNA	21482590	21486479	-
GWHAAZE00000005	exon	21482590	21482855	-
GWHAAZE00000005	exon	21483062	21483157	-
GWHAAZE00000005	exon	21483252	21483299	-
GWHAAZE00000005	exon	21483787	21483863	-
GWHAAZE00000005	exon	21483958	21483998	-
GWHAAZE00000005	exon	21484073	21484216	-
GWHAAZE00000005	exon	21484314	21484400	-
GWHAAZE00000005	exon	21484724	21484864	-
GWHAAZE00000005	exon	21485640	21485723	-
GWHAAZE00000005	exon	21486120	21486343	-
GWHAAZE00000005	exon	21486470	21486479	-
GWHAAZE00000005	CDS	21486470	21486479	-
GWHAAZE00000005	CDS	21486120	21486343	-
GWHAAZE00000005	CDS	21485640	21485723	-
GWHAAZE00000005	CDS	21484724	21484864	-
GWHAAZE00000005	CDS	21484314	21484400	-
GWHAAZE00000005	CDS	21484073	21484216	-
GWHAAZE00000005	CDS	21483958	21483998	-
GWHAAZE00000005	CDS	21483787	21483863	-
GWHAAZE00000005	CDS	21483252	21483299	-
GWHAAZE00000005	CDS	21483062	21483157	-
GWHAAZE00000005	CDS	21482590	21482855	-

Transcript Sequence
>GWHTAAZE018605 ATGATTAAAGAAGAGTTGAAGAAAGTAATCCAATCCAATCCAACCAACACCACCACTCCTCAGGTCCCCATAGAATCCCTTCCTGTTGCTGTGGCCCTACTACTTCTCCTCACTCTAATCCTATTCTCCGCCGTAGATTCTGCCACAGCCTTCGTCGCCCTCCGCTCATCATCCGTCACCGGTTTATGTGCTCACCTCATCGATCCGGCTGGTTACCCTTGCTCCGAACACTCTACTCAAACAGAGGATGGTTACTTATTGGGTCTTCAACGCGTATCTTCTCCGGCAGGAATTTTGAAAGGGGCTAGAGGTCCTCCTGCTGGTGATGCTTGGTTTATGGATTCCCCAAATGAATCATTGGGCTTTATACTTGCTGATTGTGGTTTTGATGTTTGGGTTGGAAATGTGCGTGGGACTCGTTGGAGTTATGGGCATGTATCTTTATCAGAGAAAGATAAGGAGTTGGCTCTGTTCGACCTTGCAGAAATGCTCCGTTATGTAAAAAATATTACGAACTCCAAAGTATTTGTTGTTGGACACTCGCAGGGAACTATAATGTCTTTCGCTGCTTTTACACAGCCGGATATAGTGAATATGGTTGAGGCAGCTGCACTTCTTTGTCCTATTTCTTATTTGGATCATGTCACCGCTCCATTTGTTCTCAGAATAGTTCATATGCGTCTTGATCAGGTGATCATCGCACTGGGTATTCATCAACTTAATTTTAAAAGTGATATAGGCACTAGCATCATCGATATGATATGTGATGGGCTTGTAGACTGCAGTGACTTTCTAACTTCTATCACAGATGAGATGTCCAATATTCTTCAATCTCATTTGCCTTCTGCATATTGCTGGACAAACTGCTGCTTTAATAGCTCTCGGATTGATTTCTATCTAGAATATGAGCCTCACCCATCATCCTCAAAGAATTTGAATCATCTTTTCCAGAGAATACGGCCAACTGAAGCCCCAAAGTTTGATCTTAGCCACATACCCAAATCATTACCATTATGGATGGGCTATGGGGGAAATGATGCCTTAGCCGATGTGGCGGATGTTGAGCACACACTCAAGGAGTTGGAGTCAAAACCAGAATTGCTGTATATAGAAGACTACGGTCACATCGACTTCCTTTTGAGTGTAAAAGCAAAGGAAGATGTTTATGATAATATGGTCGAATTTTTCAGATCATTCAGTAAGTTTAGTAGTGTTTAA

Network for GWHGAAZE018583

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04083.17	Abhydro_lipase	65	96	1.10E-07
PF00561.21	Abhydrolase_1	124	208	2.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01052	LIPA	Steroid biosynthesis	map00100
		Lysosome	map04142
		Cholesterol metabolism	map04979

Gene Ontology

GO term	Ontology	Name
GO:0006629	biological_process	lipid metabolic process
GO:0016788	molecular_function	hydrolase activity, acting on ester bonds

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	29.157
	SRR3591706	second leaf	32.730
	SRR3591707	mature leaf	41.692
	SRR3591708	Shoot apex	33.060
	SRR3591709	Stem	36.835
	SRR3591710	White floral bud	5.860
	SRR3591711	White flower	5.788
	SRR3591712	Green floral bud	8.458
	SRR3591713	Yellow flower	3.499
SRP173429	SRR8316895	Juvenile bud stage	9.703
	SRR8316896	Juvenile bud stage	14.031
	SRR8316897	Juvenile bud stage	6.767
	SRR8316894	Third green stage	6.863
	SRR8316900	Third green stage	12.448
	SRR8316901	Third green stage	13.055
	SRR8316898	Complete white stage	3.427
	SRR8316899	Complete white stage	26.027
	SRR8316903	Complete white stage	10.017
	SRR8316902	Silver flowering stage	2.182
	SRR8316904	Silver flowering stage	3.300
	SRR8316905	Silver flowering stage	1.654
	SRR8316906	Gold flowering stage	6.007
	SRR8316907	Gold flowering stage	2.627
	SRR8316908	Gold flowering stage	6.025
SRP132670	SRR6706286	Control	8.462
	SRR6706287	Light intensity 50%	7.549
	SRR6706288	Light intensity 20%	7.687
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.974
	CNS0095593	Slightly white alabastrum(diploid) 2	9.346
	CNS0095594	Slightly white alabastrum(diploid) 3	8.163
	CNS0095595	Whole white alabastrum(diploid) 2	8.605
	CNS0095596	Whole white alabastrum(diploid) 3	8.144
	CNS0095597	Whole white alabastrum(diploid) 4	9.692
	CNS0095598	Silvery flower (diploied) 1	19.996
	CNS0095599	Silvery flower (diploied) 2	17.813
	CNS0095600	Silvery flower (diploied) 3	9.355
	CNS0095601	Golden flower (diploid) 1	19.177
	CNS0095602	Golden flower (diploid) 2	17.182
	CNS0095603	Golden flower (diploid) 3	15.281
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.763
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.058
	CNS0095606	Slightly white alabastrum(tetraploid) 3	23.496
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.632
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.957
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.778
	CNS0095610	Silvery flower (tetraploid) 1	13.387
	CNS0095611	Silvery flower (tetraploid) 2	16.416
	CNS0095612	Silvery flower (tetraploid) 3	3.868
	CNS0095613	Golden flower (tetraploid) 1	9.231
	CNS0095614	Golden flower (tetraploid) 2	13.101
	CNS0095615	Golden flower (tetraploid) 3	4.211
CRA001975	CRR073297	Stem 1	10.908
	CRR073298	Stem 2	10.218
	CRR073299	Stem 3	6.356
	CRR073300	Leaf 1	8.256
	CRR073301	Leaf 2	8.846
	CRR073302	Leaf 3	5.278
	CRR073303	Juvenile bud 1	4.872
	CRR073304	Juvenile bud 2	3.629
	CRR073305	Juvenile bud 3	7.907
	CRR073306	Third green 1	0.082
	CRR073307	Third green 2	0.043
	CRR073308	Third green 3	0.336
	CRR073309	Second white 1	0.069
	CRR073310	Second white 2	0.173
	CRR073311	Second white 3	0.044
	CRR073312	Silver flowering 1	0.512
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	7.609
	CRR073316	Gold flowering 2	11.382
	CRR073317	Gold flowering 3	9.788
	CRR073318	Tawny withering 1	10.034
	CRR073319	Tawny withering 2	5.139
	CRR073320	Tawny withering 3	8.693