Detail information of GWHGAAZE018478


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010254958.13.1457E-180PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 [Nelumbo nucifera]
Swissprottr|Q9LHN4|LPAT5_ARATH1E-158Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5
trEMBLtr|F6HQJ8|F6HQJ8_VITVI5E-178Putative uncharacterized protein {ECO:0000313|EMBL:CCB56955.1}
TAIR10AT3G18850.42E-127lysophosphatidyl acyltransferase 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2007644220080169-
GWHAAZE00000005mRNA2007644220080169-
GWHAAZE00000005exon2007962220080169-
GWHAAZE00000005exon2007938520079515-
GWHAAZE00000005exon2007672220076940-
GWHAAZE00000005exon2007644220076491-
GWHAAZE00000005CDS2007962220080169-
GWHAAZE00000005CDS2007938520079515-
GWHAAZE00000005CDS2007672220076940-
GWHAAZE00000005CDS2007644220076491-
Transcript Sequence

Network for GWHGAAZE018478

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase802351.90E-20
PF16076.6Acyltransf_C2473041.00E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13513LCLAT1, AGPAT8 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.628
SRR3591706second leaf4.494
SRR3591707mature leaf2.710
SRR3591708Shoot apex14.032
SRR3591709Stem9.639
SRR3591710White floral bud8.392
SRR3591711White flower14.206
SRR3591712Green floral bud9.294
SRR3591713Yellow flower9.458
SRP173429 SRR8316895Juvenile bud stage 6.376
SRR8316896Juvenile bud stage 8.396
SRR8316897Juvenile bud stage 4.807
SRR8316894Third green stage 3.775
SRR8316900Third green stage 10.959
SRR8316901Third green stage 8.750
SRR8316898Complete white stage 4.381
SRR8316899Complete white stage 13.910
SRR8316903Complete white stage 7.572
SRR8316902Silver flowering stage5.444
SRR8316904Silver flowering stage8.781
SRR8316905Silver flowering stage4.016
SRR8316906Gold flowering stage 15.734
SRR8316907Gold flowering stage 11.854
SRR8316908Gold flowering stage 18.728
SRP132670SRR6706286Control7.270
SRR6706287Light intensity 50%8.223
SRR6706288Light intensity 20%8.133
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.970
CNS0095593Slightly white alabastrum(diploid) 25.574
CNS0095594Slightly white alabastrum(diploid) 35.639
CNS0095595Whole white alabastrum(diploid) 23.901
CNS0095596Whole white alabastrum(diploid) 34.918
CNS0095597Whole white alabastrum(diploid) 45.338
CNS0095598Silvery flower (diploied) 111.309
CNS0095599Silvery flower (diploied) 27.446
CNS0095600Silvery flower (diploied) 310.852
CNS0095601Golden flower (diploid) 110.281
CNS0095602Golden flower (diploid) 211.816
CNS0095603Golden flower (diploid) 311.162
CNS0095604Slightly white alabastrum(tetraploid) 16.907
CNS0095605Slightly white alabastrum(tetraploid) 26.345
CNS0095606Slightly white alabastrum(tetraploid) 312.062
CNS0095607Whole white alabastrum(tetraploid) 14.279
CNS0095608Whole white alabastrum(tetraploid) 22.649
CNS0095609Whole white alabastrum(tetraploid) 36.034
CNS0095610Silvery flower (tetraploid) 110.950
CNS0095611Silvery flower (tetraploid) 212.609
CNS0095612Silvery flower (tetraploid) 38.932
CNS0095613Golden flower (tetraploid) 15.122
CNS0095614Golden flower (tetraploid) 211.255
CNS0095615Golden flower (tetraploid) 311.362
CRA001975CRR073297Stem 19.917
CRR073298Stem 28.534
CRR073299Stem 37.502
CRR073300Leaf 19.096
CRR073301Leaf 28.441
CRR073302Leaf 38.336
CRR073303Juvenile bud 17.781
CRR073304Juvenile bud 26.265
CRR073305Juvenile bud 311.174
CRR073306Third green 12.303
CRR073307Third green 21.025
CRR073308Third green 32.204
CRR073309Second white 15.886
CRR073310Second white 21.899
CRR073311Second white 33.093
CRR073312Silver flowering 15.008
CRR073313Silver flowering 22.983
CRR073314Silver flowering 33.938
CRR073315Gold flowering 14.875
CRR073316Gold flowering 26.351
CRR073317Gold flowering 34.665
CRR073318Tawny withering 18.543
CRR073319Tawny withering 26.095
CRR073320Tawny withering 38.075