Detail information of GWHGAAZE018379


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO96970.11.80547E-43unnamed protein product [Coffea canephora]
Swissprottr|P33083|AX6B_SOYBN5E-33Auxin-induced protein 6B
trEMBLtr|A0A068TKX1|A0A068TKX1_COFCA7E-44Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO96970.1}
TAIR10AT4G38840.12E-28SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1872262018722907+
GWHAAZE00000005mRNA1872262018722907+
GWHAAZE00000005exon1872262018722907+
GWHAAZE00000005CDS1872262018722907+
Transcript Sequence

Network for GWHGAAZE018379

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible19932.50E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.051
SRR3591706second leaf20.177
SRR3591707mature leaf2.271
SRR3591708Shoot apex9.162
SRR3591709Stem3.205
SRR3591710White floral bud14.567
SRR3591711White flower6.101
SRR3591712Green floral bud13.795
SRR3591713Yellow flower0.652
SRP173429 SRR8316895Juvenile bud stage 1.797
SRR8316896Juvenile bud stage 6.330
SRR8316897Juvenile bud stage 1.735
SRR8316894Third green stage 2.356
SRR8316900Third green stage 28.512
SRR8316901Third green stage 20.574
SRR8316898Complete white stage 33.413
SRR8316899Complete white stage 13.206
SRR8316903Complete white stage 39.945
SRR8316902Silver flowering stage12.866
SRR8316904Silver flowering stage20.660
SRR8316905Silver flowering stage12.205
SRR8316906Gold flowering stage 19.940
SRR8316907Gold flowering stage 14.858
SRR8316908Gold flowering stage 15.437
SRP132670SRR6706286Control7.879
SRR6706287Light intensity 50%9.538
SRR6706288Light intensity 20%8.603
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.509
CNS0095593Slightly white alabastrum(diploid) 223.838
CNS0095594Slightly white alabastrum(diploid) 310.149
CNS0095595Whole white alabastrum(diploid) 228.406
CNS0095596Whole white alabastrum(diploid) 333.565
CNS0095597Whole white alabastrum(diploid) 434.675
CNS0095598Silvery flower (diploied) 18.298
CNS0095599Silvery flower (diploied) 213.457
CNS0095600Silvery flower (diploied) 315.648
CNS0095601Golden flower (diploid) 14.537
CNS0095602Golden flower (diploid) 23.038
CNS0095603Golden flower (diploid) 32.426
CNS0095604Slightly white alabastrum(tetraploid) 116.460
CNS0095605Slightly white alabastrum(tetraploid) 213.177
CNS0095606Slightly white alabastrum(tetraploid) 325.069
CNS0095607Whole white alabastrum(tetraploid) 114.191
CNS0095608Whole white alabastrum(tetraploid) 215.065
CNS0095609Whole white alabastrum(tetraploid) 312.994
CNS0095610Silvery flower (tetraploid) 112.463
CNS0095611Silvery flower (tetraploid) 224.358
CNS0095612Silvery flower (tetraploid) 35.314
CNS0095613Golden flower (tetraploid) 110.174
CNS0095614Golden flower (tetraploid) 25.440
CNS0095615Golden flower (tetraploid) 346.165
CRA001975CRR073297Stem 12.767
CRR073298Stem 23.130
CRR073299Stem 31.103
CRR073300Leaf 13.151
CRR073301Leaf 23.028
CRR073302Leaf 31.977
CRR073303Juvenile bud 15.159
CRR073304Juvenile bud 22.200
CRR073305Juvenile bud 33.034
CRR073306Third green 14.533
CRR073307Third green 28.417
CRR073308Third green 37.316
CRR073309Second white 13.481
CRR073310Second white 22.470
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.388
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.551
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.106
CRR073320Tawny withering 30.000