Detail information of GWHGAAZE018269


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007041615.11.5578E-116C2H2-like zinc finger protein, putative [Theobroma cacao]
Swissprottr|O65499|ZAT3_ARATH7E-84Zinc finger protein ZAT3
trEMBLtr|A0A061DZD1|A0A061DZD1_THECC6E-117C2H2-like zinc finger protein, putative {ECO:0000313|EMBL:EOX97446.1}
TAIR10AT4G35280.14E-65C2H2-like zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1727013117271054-
GWHAAZE00000005mRNA1727013117271054-
GWHAAZE00000005exon1727013117271054-
GWHAAZE00000005CDS1727013117271054-
Transcript Sequence

Network for GWHGAAZE018269

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_6801034.60E-07
PF13912.7zf-C2H2_61651881.40E-08
PF13912.7zf-C2H2_62292544.50E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud7.409
SRR3591711White flower0.772
SRR3591712Green floral bud3.224
SRR3591713Yellow flower0.422
SRP173429 SRR8316895Juvenile bud stage 0.055
SRR8316896Juvenile bud stage 0.072
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.125
SRR8316900Third green stage 1.800
SRR8316901Third green stage 1.557
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.149
SRR8316905Silver flowering stage0.061
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.162
SRR6706287Light intensity 50%1.153
SRR6706288Light intensity 20%0.939
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.825
CNS0095593Slightly white alabastrum(diploid) 20.276
CNS0095594Slightly white alabastrum(diploid) 30.284
CNS0095595Whole white alabastrum(diploid) 22.943
CNS0095596Whole white alabastrum(diploid) 33.258
CNS0095597Whole white alabastrum(diploid) 43.124
CNS0095598Silvery flower (diploied) 10.097
CNS0095599Silvery flower (diploied) 20.186
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.188
CNS0095603Golden flower (diploid) 30.096
CNS0095604Slightly white alabastrum(tetraploid) 10.508
CNS0095605Slightly white alabastrum(tetraploid) 20.576
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 14.283
CNS0095608Whole white alabastrum(tetraploid) 24.591
CNS0095609Whole white alabastrum(tetraploid) 32.456
CNS0095610Silvery flower (tetraploid) 10.224
CNS0095611Silvery flower (tetraploid) 20.381
CNS0095612Silvery flower (tetraploid) 31.426
CNS0095613Golden flower (tetraploid) 10.123
CNS0095614Golden flower (tetraploid) 20.068
CNS0095615Golden flower (tetraploid) 30.542
CRA001975CRR073297Stem 10.204
CRR073298Stem 20.263
CRR073299Stem 30.317
CRR073300Leaf 12.262
CRR073301Leaf 21.179
CRR073302Leaf 30.392
CRR073303Juvenile bud 11.346
CRR073304Juvenile bud 21.306
CRR073305Juvenile bud 30.269
CRR073306Third green 10.743
CRR073307Third green 20.953
CRR073308Third green 30.575
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.287
CRR073312Silver flowering 10.641
CRR073313Silver flowering 21.136
CRR073314Silver flowering 30.256
CRR073315Gold flowering 11.007
CRR073316Gold flowering 20.452
CRR073317Gold flowering 30.076
CRR073318Tawny withering 10.374
CRR073319Tawny withering 20.507
CRR073320Tawny withering 30.470