Detail information of GWHGAAZE018202


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037066.10D-cysteine desulfhydrase isoform 1 [Theobroma cacao]
Swissprottr|Q6ZHE5|DCYD1_ORYSJ0Putative D-cysteine desulfhydrase 1, mitochondrial (Precursor)
trEMBLtr|A0A061FXG7|A0A061FXG7_THECC0D-cysteine desulfhydrase isoform 1 {ECO:0000313|EMBL:EOY21567.1}
TAIR10AT1G48420.19E-153D-cysteine desulfhydrase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1654607516551753-
GWHAAZE00000005mRNA1654607516551753-
GWHAAZE00000005exon1655146616551753-
GWHAAZE00000005exon1655127416551339-
GWHAAZE00000005exon1655001416550208-
GWHAAZE00000005exon1654964916549759-
GWHAAZE00000005exon1654934816549459-
GWHAAZE00000005exon1654838116548459-
GWHAAZE00000005exon1654766316547720-
GWHAAZE00000005exon1654746916547582-
GWHAAZE00000005exon1654680716546904-
GWHAAZE00000005exon1654607516546520-
GWHAAZE00000005CDS1655146616551753-
GWHAAZE00000005CDS1655127416551339-
GWHAAZE00000005CDS1655001416550208-
GWHAAZE00000005CDS1654964916549759-
GWHAAZE00000005CDS1654934816549459-
GWHAAZE00000005CDS1654838116548459-
GWHAAZE00000005CDS1654766316547720-
GWHAAZE00000005CDS1654746916547582-
GWHAAZE00000005CDS1654680716546904-
GWHAAZE00000005CDS1654631616546520-
GWHAAZE00000005three_prime_UTR1654607516546315-
Transcript Sequence

Network for GWHGAAZE018202

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00291.26PALP944035.20E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05396dcyD Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.744
SRR3591706second leaf34.781
SRR3591707mature leaf29.636
SRR3591708Shoot apex45.740
SRR3591709Stem41.802
SRR3591710White floral bud57.889
SRR3591711White flower62.378
SRR3591712Green floral bud60.256
SRR3591713Yellow flower85.845
SRP173429 SRR8316895Juvenile bud stage 33.006
SRR8316896Juvenile bud stage 46.636
SRR8316897Juvenile bud stage 25.014
SRR8316894Third green stage 22.505
SRR8316900Third green stage 86.903
SRR8316901Third green stage 73.325
SRR8316898Complete white stage 36.892
SRR8316899Complete white stage 77.388
SRR8316903Complete white stage 45.803
SRR8316902Silver flowering stage42.579
SRR8316904Silver flowering stage48.821
SRR8316905Silver flowering stage29.104
SRR8316906Gold flowering stage 97.043
SRR8316907Gold flowering stage 98.604
SRR8316908Gold flowering stage 99.678
SRP132670SRR6706286Control73.983
SRR6706287Light intensity 50%80.257
SRR6706288Light intensity 20%87.299
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.496
CNS0095593Slightly white alabastrum(diploid) 236.830
CNS0095594Slightly white alabastrum(diploid) 336.937
CNS0095595Whole white alabastrum(diploid) 239.444
CNS0095596Whole white alabastrum(diploid) 345.292
CNS0095597Whole white alabastrum(diploid) 431.955
CNS0095598Silvery flower (diploied) 135.806
CNS0095599Silvery flower (diploied) 239.365
CNS0095600Silvery flower (diploied) 366.145
CNS0095601Golden flower (diploid) 141.225
CNS0095602Golden flower (diploid) 260.452
CNS0095603Golden flower (diploid) 359.406
CNS0095604Slightly white alabastrum(tetraploid) 140.361
CNS0095605Slightly white alabastrum(tetraploid) 241.980
CNS0095606Slightly white alabastrum(tetraploid) 349.245
CNS0095607Whole white alabastrum(tetraploid) 128.934
CNS0095608Whole white alabastrum(tetraploid) 235.110
CNS0095609Whole white alabastrum(tetraploid) 368.454
CNS0095610Silvery flower (tetraploid) 179.916
CNS0095611Silvery flower (tetraploid) 288.096
CNS0095612Silvery flower (tetraploid) 391.592
CNS0095613Golden flower (tetraploid) 159.872
CNS0095614Golden flower (tetraploid) 278.721
CNS0095615Golden flower (tetraploid) 366.994
CRA001975CRR073297Stem 150.780
CRR073298Stem 252.640
CRR073299Stem 351.626
CRR073300Leaf 163.573
CRR073301Leaf 263.726
CRR073302Leaf 364.653
CRR073303Juvenile bud 164.501
CRR073304Juvenile bud 276.180
CRR073305Juvenile bud 363.198
CRR073306Third green 162.055
CRR073307Third green 242.565
CRR073308Third green 350.567
CRR073309Second white 158.900
CRR073310Second white 261.985
CRR073311Second white 357.167
CRR073312Silver flowering 145.681
CRR073313Silver flowering 237.326
CRR073314Silver flowering 346.397
CRR073315Gold flowering 126.244
CRR073316Gold flowering 239.220
CRR073317Gold flowering 319.826
CRR073318Tawny withering 127.507
CRR073319Tawny withering 227.130
CRR073320Tawny withering 327.375