Detail information of GWHGAAZE018154


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008240152.10PREDICTED: phosphoethanolamine N-methyltransferase 1 isoform X1 [Prunus mume]
Swissprottr|Q9FR44|PEAM1_ARATH0Phosphoethanolamine N-methyltransferase 1
trEMBLtr|M5WCW4|M5WCW4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ11141.1}
TAIR10AT1G48600.20S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1575075315755756-
GWHAAZE00000005mRNA1575075315755756-
GWHAAZE00000005exon1575574115755756-
GWHAAZE00000005exon1575550815755623-
GWHAAZE00000005exon1575435815754495-
GWHAAZE00000005exon1575409415754231-
GWHAAZE00000005exon1575365915753802-
GWHAAZE00000005exon1575338315753493-
GWHAAZE00000005exon1575314615753287-
GWHAAZE00000005exon1575263815752918-
GWHAAZE00000005exon1575173315751894-
GWHAAZE00000005exon1575142515751478-
GWHAAZE00000005exon1575125015751324-
GWHAAZE00000005exon1575075315751135-
GWHAAZE00000005CDS1575574115755756-
GWHAAZE00000005CDS1575550815755623-
GWHAAZE00000005CDS1575435815754495-
GWHAAZE00000005CDS1575409415754231-
GWHAAZE00000005CDS1575365915753802-
GWHAAZE00000005CDS1575338315753493-
GWHAAZE00000005CDS1575314615753287-
GWHAAZE00000005CDS1575263815752918-
GWHAAZE00000005CDS1575173315751894-
GWHAAZE00000005CDS1575142515751478-
GWHAAZE00000005CDS1575125015751324-
GWHAAZE00000005CDS1575104015751135-
GWHAAZE00000005three_prime_UTR1575075315751039-
Transcript Sequence

Network for GWHGAAZE018154

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08241.13Methyltransf_11581564.10E-14
PF13489.7Methyltransf_232734264.40E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05929E2.1.1.103, NMT Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0006656biological_processphosphatidylcholine biosynthetic process
GO:0000234molecular_functionphosphoethanolamine N-methyltransferase activity
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf200.905
SRR3591706second leaf147.810
SRR3591707mature leaf12.111
SRR3591708Shoot apex260.673
SRR3591709Stem23.397
SRR3591710White floral bud269.671
SRR3591711White flower52.019
SRR3591712Green floral bud912.212
SRR3591713Yellow flower14.134
SRP173429 SRR8316895Juvenile bud stage 202.487
SRR8316896Juvenile bud stage 333.959
SRR8316897Juvenile bud stage 152.797
SRR8316894Third green stage 196.111
SRR8316900Third green stage 508.494
SRR8316901Third green stage 482.488
SRR8316898Complete white stage 46.188
SRR8316899Complete white stage 251.324
SRR8316903Complete white stage 65.281
SRR8316902Silver flowering stage10.955
SRR8316904Silver flowering stage15.081
SRR8316905Silver flowering stage4.106
SRR8316906Gold flowering stage 10.472
SRR8316907Gold flowering stage 7.846
SRR8316908Gold flowering stage 13.834
SRP132670SRR6706286Control152.963
SRR6706287Light intensity 50%183.267
SRR6706288Light intensity 20%211.009
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1409.467
CNS0095593Slightly white alabastrum(diploid) 2735.626
CNS0095594Slightly white alabastrum(diploid) 3319.016
CNS0095595Whole white alabastrum(diploid) 2444.269
CNS0095596Whole white alabastrum(diploid) 3469.877
CNS0095597Whole white alabastrum(diploid) 4351.723
CNS0095598Silvery flower (diploied) 1109.907
CNS0095599Silvery flower (diploied) 2168.496
CNS0095600Silvery flower (diploied) 354.566
CNS0095601Golden flower (diploid) 133.626
CNS0095602Golden flower (diploid) 217.037
CNS0095603Golden flower (diploid) 315.885
CNS0095604Slightly white alabastrum(tetraploid) 1761.684
CNS0095605Slightly white alabastrum(tetraploid) 2646.005
CNS0095606Slightly white alabastrum(tetraploid) 31413.968
CNS0095607Whole white alabastrum(tetraploid) 1327.261
CNS0095608Whole white alabastrum(tetraploid) 2350.093
CNS0095609Whole white alabastrum(tetraploid) 3721.059
CNS0095610Silvery flower (tetraploid) 119.359
CNS0095611Silvery flower (tetraploid) 227.887
CNS0095612Silvery flower (tetraploid) 329.687
CNS0095613Golden flower (tetraploid) 16.325
CNS0095614Golden flower (tetraploid) 27.291
CNS0095615Golden flower (tetraploid) 37.724
CRA001975CRR073297Stem 1267.872
CRR073298Stem 2286.813
CRR073299Stem 3198.075
CRR073300Leaf 1238.792
CRR073301Leaf 2259.002
CRR073302Leaf 3214.440
CRR073303Juvenile bud 1364.473
CRR073304Juvenile bud 2252.766
CRR073305Juvenile bud 3137.837
CRR073306Third green 179.952
CRR073307Third green 245.649
CRR073308Third green 350.311
CRR073309Second white 17.952
CRR073310Second white 24.667
CRR073311Second white 35.562
CRR073312Silver flowering 112.062
CRR073313Silver flowering 215.370
CRR073314Silver flowering 35.547
CRR073315Gold flowering 113.814
CRR073316Gold flowering 29.480
CRR073317Gold flowering 39.541
CRR073318Tawny withering 117.150
CRR073319Tawny withering 214.677
CRR073320Tawny withering 316.812