Detail information of GWHGAAZE018088


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO98429.10unnamed protein product [Coffea canephora]
trEMBLtr|A0A068TR44|A0A068TR44_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313|EMBL:CDO98429.1}
TAIR10AT1G73850.19E-91Protein of unknown function (DUF1666)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1488270914895757-
GWHAAZE00000005mRNA1488270914895757-
GWHAAZE00000005exon1489573814895757-
GWHAAZE00000005exon1488507814885430-
GWHAAZE00000005exon1488462814884978-
GWHAAZE00000005exon1488382914884206-
GWHAAZE00000005exon1488307314883290-
GWHAAZE00000005exon1488270914882954-
GWHAAZE00000005CDS1489573814895757-
GWHAAZE00000005CDS1488507814885430-
GWHAAZE00000005CDS1488462814884978-
GWHAAZE00000005CDS1488382914884206-
GWHAAZE00000005CDS1488307314883290-
GWHAAZE00000005CDS1488270914882954-
Transcript Sequence

Network for GWHGAAZE018088

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07891.13DUF16662805192.10E-94
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.214
SRR3591706second leaf5.038
SRR3591707mature leaf2.498
SRR3591708Shoot apex13.341
SRR3591709Stem13.834
SRR3591710White floral bud17.273
SRR3591711White flower5.294
SRR3591712Green floral bud13.933
SRR3591713Yellow flower1.485
SRP173429 SRR8316895Juvenile bud stage 6.602
SRR8316896Juvenile bud stage 10.590
SRR8316897Juvenile bud stage 3.944
SRR8316894Third green stage 3.119
SRR8316900Third green stage 8.754
SRR8316901Third green stage 12.005
SRR8316898Complete white stage 3.419
SRR8316899Complete white stage 18.844
SRR8316903Complete white stage 9.285
SRR8316902Silver flowering stage0.711
SRR8316904Silver flowering stage1.371
SRR8316905Silver flowering stage0.463
SRR8316906Gold flowering stage 0.461
SRR8316907Gold flowering stage 1.362
SRR8316908Gold flowering stage 0.678
SRP132670SRR6706286Control8.050
SRR6706287Light intensity 50%6.794
SRR6706288Light intensity 20%5.984
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.880
CNS0095593Slightly white alabastrum(diploid) 25.102
CNS0095594Slightly white alabastrum(diploid) 35.508
CNS0095595Whole white alabastrum(diploid) 24.162
CNS0095596Whole white alabastrum(diploid) 32.584
CNS0095597Whole white alabastrum(diploid) 43.287
CNS0095598Silvery flower (diploied) 14.932
CNS0095599Silvery flower (diploied) 24.440
CNS0095600Silvery flower (diploied) 34.215
CNS0095601Golden flower (diploid) 14.954
CNS0095602Golden flower (diploid) 24.600
CNS0095603Golden flower (diploid) 34.691
CNS0095604Slightly white alabastrum(tetraploid) 14.648
CNS0095605Slightly white alabastrum(tetraploid) 23.505
CNS0095606Slightly white alabastrum(tetraploid) 314.836
CNS0095607Whole white alabastrum(tetraploid) 12.856
CNS0095608Whole white alabastrum(tetraploid) 21.598
CNS0095609Whole white alabastrum(tetraploid) 35.505
CNS0095610Silvery flower (tetraploid) 12.529
CNS0095611Silvery flower (tetraploid) 21.763
CNS0095612Silvery flower (tetraploid) 32.471
CNS0095613Golden flower (tetraploid) 10.214
CNS0095614Golden flower (tetraploid) 21.315
CNS0095615Golden flower (tetraploid) 33.086
CRA001975CRR073297Stem 15.266
CRR073298Stem 28.370
CRR073299Stem 35.536
CRR073300Leaf 116.397
CRR073301Leaf 211.874
CRR073302Leaf 39.266
CRR073303Juvenile bud 19.934
CRR073304Juvenile bud 210.256
CRR073305Juvenile bud 310.628
CRR073306Third green 10.868
CRR073307Third green 22.409
CRR073308Third green 32.020
CRR073309Second white 10.081
CRR073310Second white 20.687
CRR073311Second white 30.413
CRR073312Silver flowering 10.369
CRR073313Silver flowering 20.299
CRR073314Silver flowering 30.342
CRR073315Gold flowering 12.370
CRR073316Gold flowering 22.164
CRR073317Gold flowering 31.168
CRR073318Tawny withering 15.381
CRR073319Tawny withering 24.576
CRR073320Tawny withering 36.684