Detail information of GWHGAAZE017547


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010244788.16.86194E-61PREDICTED: uncharacterized protein LOC104588523 [Nelumbo nucifera]
trEMBLtr|A0A068TPR2|A0A068TPR2_COFCA3E-56Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313|EMBL:CDO98201.1}
TAIR10AT1G15800.10.000000007Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene77650997769935-
GWHAAZE00000005mRNA77650997769935-
GWHAAZE00000005exon77696277769935-
GWHAAZE00000005exon77661177766167-
GWHAAZE00000005exon77658027765864-
GWHAAZE00000005exon77656407765708-
GWHAAZE00000005exon77650997765347-
GWHAAZE00000005CDS77696277769935-
GWHAAZE00000005CDS77661177766167-
GWHAAZE00000005CDS77658027765864-
GWHAAZE00000005CDS77656407765708-
GWHAAZE00000005CDS77650997765347-
Transcript Sequence

Network for GWHGAAZE017547

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.011
SRR3591706second leaf15.965
SRR3591707mature leaf11.730
SRR3591708Shoot apex28.047
SRR3591709Stem18.421
SRR3591710White floral bud11.460
SRR3591711White flower14.625
SRR3591712Green floral bud7.869
SRR3591713Yellow flower6.397
SRP173429 SRR8316895Juvenile bud stage 11.359
SRR8316896Juvenile bud stage 9.150
SRR8316897Juvenile bud stage 6.434
SRR8316894Third green stage 2.259
SRR8316900Third green stage 3.195
SRR8316901Third green stage 3.868
SRR8316898Complete white stage 1.563
SRR8316899Complete white stage 7.999
SRR8316903Complete white stage 3.646
SRR8316902Silver flowering stage2.832
SRR8316904Silver flowering stage3.870
SRR8316905Silver flowering stage1.591
SRR8316906Gold flowering stage 5.767
SRR8316907Gold flowering stage 8.111
SRR8316908Gold flowering stage 9.939
SRP132670SRR6706286Control5.941
SRR6706287Light intensity 50%5.861
SRR6706288Light intensity 20%4.804
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.765
CNS0095593Slightly white alabastrum(diploid) 29.853
CNS0095594Slightly white alabastrum(diploid) 38.380
CNS0095595Whole white alabastrum(diploid) 27.080
CNS0095596Whole white alabastrum(diploid) 30.467
CNS0095597Whole white alabastrum(diploid) 43.491
CNS0095598Silvery flower (diploied) 110.459
CNS0095599Silvery flower (diploied) 212.365
CNS0095600Silvery flower (diploied) 37.687
CNS0095601Golden flower (diploid) 112.153
CNS0095602Golden flower (diploid) 29.280
CNS0095603Golden flower (diploid) 310.824
CNS0095604Slightly white alabastrum(tetraploid) 13.156
CNS0095605Slightly white alabastrum(tetraploid) 22.380
CNS0095606Slightly white alabastrum(tetraploid) 36.512
CNS0095607Whole white alabastrum(tetraploid) 12.661
CNS0095608Whole white alabastrum(tetraploid) 21.191
CNS0095609Whole white alabastrum(tetraploid) 32.096
CNS0095610Silvery flower (tetraploid) 13.281
CNS0095611Silvery flower (tetraploid) 22.557
CNS0095612Silvery flower (tetraploid) 32.968
CNS0095613Golden flower (tetraploid) 11.744
CNS0095614Golden flower (tetraploid) 22.000
CNS0095615Golden flower (tetraploid) 30.552
CRA001975CRR073297Stem 119.220
CRR073298Stem 212.558
CRR073299Stem 317.391
CRR073300Leaf 17.448
CRR073301Leaf 29.764
CRR073302Leaf 36.276
CRR073303Juvenile bud 13.077
CRR073304Juvenile bud 25.108
CRR073305Juvenile bud 35.909
CRR073306Third green 122.925
CRR073307Third green 215.095
CRR073308Third green 319.909
CRR073309Second white 112.162
CRR073310Second white 210.269
CRR073311Second white 310.893
CRR073312Silver flowering 117.248
CRR073313Silver flowering 215.761
CRR073314Silver flowering 312.810
CRR073315Gold flowering 18.219
CRR073316Gold flowering 29.889
CRR073317Gold flowering 311.576
CRR073318Tawny withering 128.175
CRR073319Tawny withering 271.343
CRR073320Tawny withering 332.359