Detail information of GWHGAAZE017526


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002263979.10PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Vitis vinifera]
Swissprottr|Q9SSQ4|FRS6_ARATH0Protein FAR1-RELATED SEQUENCE 6
trEMBLtr|F6HXG3|F6HXG3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59633.1}
TAIR10AT1G52520.10FAR1-related sequence 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene74698927471903-
GWHAAZE00000005mRNA74698927471903-
GWHAAZE00000005exon74704147471903-
GWHAAZE00000005exon74698927470351-
GWHAAZE00000005CDS74704147471903-
GWHAAZE00000005CDS74698927470351-
Transcript Sequence

Network for GWHGAAZE017526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1601431.20E-21
PF10551.10MULE2623561.40E-28
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.154
SRR3591706second leaf2.802
SRR3591707mature leaf2.201
SRR3591708Shoot apex6.156
SRR3591709Stem4.084
SRR3591710White floral bud4.476
SRR3591711White flower5.090
SRR3591712Green floral bud3.576
SRR3591713Yellow flower4.687
SRP173429 SRR8316895Juvenile bud stage 2.057
SRR8316896Juvenile bud stage 4.076
SRR8316897Juvenile bud stage 1.758
SRR8316894Third green stage 1.826
SRR8316900Third green stage 6.080
SRR8316901Third green stage 4.395
SRR8316898Complete white stage 2.512
SRR8316899Complete white stage 4.865
SRR8316903Complete white stage 4.488
SRR8316902Silver flowering stage2.332
SRR8316904Silver flowering stage5.395
SRR8316905Silver flowering stage2.501
SRR8316906Gold flowering stage 7.452
SRR8316907Gold flowering stage 4.682
SRR8316908Gold flowering stage 6.730
SRP132670SRR6706286Control2.896
SRR6706287Light intensity 50%2.358
SRR6706288Light intensity 20%2.917
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.605
CNS0095593Slightly white alabastrum(diploid) 22.444
CNS0095594Slightly white alabastrum(diploid) 32.936
CNS0095595Whole white alabastrum(diploid) 23.639
CNS0095596Whole white alabastrum(diploid) 33.055
CNS0095597Whole white alabastrum(diploid) 44.082
CNS0095598Silvery flower (diploied) 12.464
CNS0095599Silvery flower (diploied) 22.952
CNS0095600Silvery flower (diploied) 36.268
CNS0095601Golden flower (diploid) 11.941
CNS0095602Golden flower (diploid) 25.122
CNS0095603Golden flower (diploid) 35.634
CNS0095604Slightly white alabastrum(tetraploid) 12.793
CNS0095605Slightly white alabastrum(tetraploid) 22.852
CNS0095606Slightly white alabastrum(tetraploid) 35.750
CNS0095607Whole white alabastrum(tetraploid) 12.452
CNS0095608Whole white alabastrum(tetraploid) 22.541
CNS0095609Whole white alabastrum(tetraploid) 34.250
CNS0095610Silvery flower (tetraploid) 16.693
CNS0095611Silvery flower (tetraploid) 27.282
CNS0095612Silvery flower (tetraploid) 37.383
CNS0095613Golden flower (tetraploid) 13.800
CNS0095614Golden flower (tetraploid) 26.482
CNS0095615Golden flower (tetraploid) 38.341
CRA001975CRR073297Stem 14.014
CRR073298Stem 24.647
CRR073299Stem 32.650
CRR073300Leaf 13.736
CRR073301Leaf 22.436
CRR073302Leaf 32.266
CRR073303Juvenile bud 12.337
CRR073304Juvenile bud 23.109
CRR073305Juvenile bud 32.515
CRR073306Third green 11.433
CRR073307Third green 21.699
CRR073308Third green 31.714
CRR073309Second white 12.645
CRR073310Second white 21.426
CRR073311Second white 32.347
CRR073312Silver flowering 12.572
CRR073313Silver flowering 23.301
CRR073314Silver flowering 32.751
CRR073315Gold flowering 10.397
CRR073316Gold flowering 20.922
CRR073317Gold flowering 31.025
CRR073318Tawny withering 11.751
CRR073319Tawny withering 21.500
CRR073320Tawny withering 31.418